- Scientific Name
- Glycine max
- Common Names
- soybeans; soybean; Phaseolus max
- Bioproject
- PRJCA012130
- Biosample
- SAMC1234255
- Accession No.
- GWHCBHU00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 40,350,378 (SNP), 12,368,700 (Indel)
- Submitter Organization
- college of agronomy, Hebei Agricultural University
- Contact
- Caiying Zhang, zhangcaiying@hebau.edu.cn
- Sequence author(s)
- Caiying Zhang
- Released Date
- 2025-05-31
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- NextDenovo v2.4.0
NextPolish v1.3.1
HiCUP version 0.8.0
ALLHiC v0.9.8 - Sequencing & coverage
- PacBio 136.65
Bionanol 120.21
Illumina HiSeq 4000 101.18
Hi-C 107.39 - Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHCBHU00000000 | - | NDD2 | Draft genome in chromosome level | 2025-05-31 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,013,667,076 |
| GC content | 35.03% |
| Chromosomes sequence No. | 20 |
| Genome sequence No. | 187 |
| Maximum genome sequence length (bp) | 60,775,310 |
| Minimum genome sequence length (bp) | 54,829 |
| Average genome sequence length (bp) | 5,420,680 |
| Genome sequence N50 (bp) | 50,866,983 |
| Genome sequence N90 (bp) | 41,238,723 |