- Scientific Name
- Malus domestica
- Common Names
- apple tree, cultivated apple; apple; Malus communis, Malus pumila auct., Malus pumila var. domestica, Malus sylvestris var. domestica, Malus x domestica, Pyrus malus, Pyrus malus var. domestica
- Bioproject
- PRJCA017466
- Biosample
- SAMC1275931
- Accession No.
- GWHDECP00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 80,507,572 (SNP), 11,854,944 (Indel)
- Submitter Organization
- Horticulture, China Agricultural University
- Contact
- Haochen Sun(fei_chen980615@163.com)
- Sequence author(s)
- Haochen Sun
- Released Date
- 2025-02-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 0.16.1-r375
- Sequencing & coverage
- PacBio 33.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDECP00000000 | - | RoyalGL haploid B genome | Draft genome in chromosome level | 2025-02-10 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 677,237,152 |
| GC content | 38.91% |
| Chromosomes sequence No. | 9 |
| Genome sequence No. | 242 |
| Maximum genome sequence length (bp) | 55,191,973 |
| Minimum genome sequence length (bp) | 1,000 |
| Average genome sequence length (bp) | 2,798,501 |
| Genome sequence N50 (bp) | 37,604,407 |
| Genome sequence N90 (bp) | 31,118,636 |