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  • Malus domestica
    • Scientific Name Malus domestica
    Common Name apple tree, cultivated apple; apple; Malus communis, Malus pumila auct., Malus pumila var. domestica, Malus sylvestris var. domestica, Malus x domestica, Pyrus malus, Pyrus malus var. domestica
    Taxonomy ID 3750
    Lineage cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
    External Links

    Assemblies (126)

    Assembly name Accession No. Reannotation Accession No. Genome reperesentation Genome size Assembly level Quality control Release date Download Download RefSeq
    DNAGFFRNAProteinDNAGFFRNAProtein
    Oregon Spur II GWHBJED00000000 - Full Genome 649,577,920 bp Chromosome true 2022-09-03 FTP FTP FTP FTP ////
    Fuji unphased genome GWHBJVD00000000 - Full Genome 736,974,464 bp Chromosome false 2023-12-05 FTP FTP FTP FTP ////
    Fuji phased haploid A genome GWHBJVF00000000 - Full Genome 692,808,576 bp Chromosome false 2023-11-11 FTP FTP FTP FTP ////
    MM106 unphased genome GWHBJVG00000000 - Full Genome 704,846,336 bp Chromosome false 2023-11-11 FTP FTP FTP FTP ////
    Fuji phased haploid B genome GWHBJVH00000000 - Full Genome 671,417,792 bp Chromosome false 2023-11-11 FTP FTP FTP FTP ////
    MM106 phased haploid A genome GWHBJVI00000000 - Full Genome 688,999,872 bp Chromosome false 2023-11-11 FTP FTP FTP FTP ////
    M9 phased haploid A genome GWHBJVJ00000000 - Full Genome 697,386,496 bp Chromosome false 2023-11-11 FTP FTP FTP FTP ////
    M9 phased haploid B genome GWHBJVK00000000 - Full Genome 669,713,984 bp Chromosome false 2023-11-11 FTP FTP FTP FTP ////
    MM106 phased haploid B genome GWHBJVL00000000 - Full Genome 682,572,480 bp Chromosome false 2023-11-11 FTP FTP FTP FTP ////
    Hanfu GWHBOTC00000000 - Full Genome 631,734,080 bp Chromosome true 2022-09-27 FTP / / / ////
    M9 unphased genome GWHBWDH00000000 - Full Genome 702,392,320 bp Chromosome false 2023-11-11 FTP FTP FTP FTP ////
    Malus domestica 'Golden Delicious' phased haploid B genome assembly GWHCBEK00000000 - Full Genome 664,780,992 bp Contig false 2025-02-10 FTP FTP FTP FTP ////
    Malus domestica 'Golden Delicious' phased haploid A genome assembly GWHCBEL00000000 - Full Genome 693,132,928 bp Contig false 2025-02-10 FTP FTP FTP FTP ////
    RoyalGL haploid B genome GWHDECP00000000 - Full Genome 677,237,120 bp Chromosome true 2025-02-10 FTP / / / ////
    GL3 haploid B genome GWHDECS00000000 - Full Genome 671,711,808 bp Chromosome true 2025-02-10 FTP / / / ////
    MM106 haploid consensus genome GWHBJVG00000000.1 - Full Genome 704,734,464 bp Chromosome false 2023-11-28 FTP FTP FTP FTP ////
    M9 haploid consensus genome GWHBWDH00000000.1 - Full Genome 702,392,320 bp Chromosome false 2023-11-28 FTP FTP FTP FTP ////
    MM106 haplome A genome GWHBJVI00000000.1 - Full Genome 688,888,064 bp Chromosome false 2023-11-28 FTP FTP FTP FTP ////
    M9 haplome B genome GWHBJVK00000000.1 - Full Genome 669,713,984 bp Chromosome false 2023-11-28 FTP FTP FTP FTP ////
    MM106 haplome B genome GWHBJVL00000000.1 - Full Genome 682,527,296 bp Chromosome false 2023-11-28 FTP FTP FTP FTP ////
    M9 haplome A genome GWHBJVJ00000000.1 - Full Genome 697,386,496 bp Chromosome false 2023-11-28 FTP FTP FTP FTP ////
    Fuji haplome B genome GWHBJVH00000000.1 - Full Genome 671,417,792 bp Chromosome false 2023-11-29 FTP FTP FTP FTP ////
    Fuji haplome A genome GWHBJVF00000000.1 - Full Genome 692,760,320 bp Chromosome false 2023-11-29 FTP FTP FTP FTP ////
    Fuji haploid consensus genome GWHBJVD00000000.2 - Full Genome 736,926,208 bp Chromosome false 2023-11-30 FTP FTP FTP FTP ////
    Fuji haploid consensus genome GWHBJVD00000000.3 - Full Genome 736,926,144 bp Chromosome false 2023-12-12 FTP FTP FTP FTP ////
    MM106 haplome B genome GWHBJVL00000000.2 - Full Genome 682,527,296 bp Chromosome false 2023-12-12 FTP FTP FTP FTP ////
    MM106 haploid consensus genome GWHBJVG00000000.2 - Full Genome 704,734,464 bp Chromosome false 2023-12-12 FTP FTP FTP FTP ////
    MM106 haplome A genome GWHBJVI00000000.2 - Full Genome 688,888,064 bp Chromosome false 2023-12-12 FTP FTP FTP FTP ////
    Fuji haplome B genome GWHBJVH00000000.2 - Full Genome 671,417,792 bp Chromosome false 2023-12-12 FTP FTP FTP FTP ////
    M9 haplome B genome GWHBJVK00000000.2 - Full Genome 669,713,984 bp Chromosome false 2023-12-13 FTP FTP FTP FTP ////
    M9 haploid consensus genome GWHBWDH00000000.2 - Full Genome 702,392,320 bp Chromosome false 2023-12-13 FTP FTP FTP FTP ////
    Fuji haplome A genome GWHBJVF00000000.2 - Full Genome 692,760,256 bp Chromosome false 2023-12-13 FTP FTP FTP FTP ////
    M9 haplome A genome GWHBJVJ00000000.2 - Full Genome 697,386,496 bp Chromosome false 2023-12-13 FTP FTP FTP FTP ////
    Malus domestica 'Golden Delicious' haploid consensus genome GWHCAWU00000000 - Full Genome 676,405,888 bp Chromosome false 2025-02-10 FTP FTP FTP FTP ////
    Fuji_Ral GWHESFA00000000 - Full Genome 661,575,488 bp Chromosome false 2024-10-30 FTP / / / ////
    Fuji_Del GWHESFB00000000 - Full Genome 658,723,520 bp Chromosome false 2024-10-30 FTP / / / ////
    MalDomGD1.0 GCA_000148765.2 GCF_000148765.1 Full Genome 1,874,368,306 bp Chromosome true 2025-01-11 FTP / / / FTP FTP FTP FTP
    ASM211411v1 GCA_002114115.1 GCF_002114115.1 Full Genome 703,358,299 bp Chromosome true 2023-12-11 FTP / / / FTP FTP FTP FTP
    ASM411538v1 GCA_004115385.1 - Full Genome 660,462,720 bp Chromosome true 2025-02-23 FTP FTP FTP FTP ////
    drMalDome10.1 alternate haplotype GCA_916048125.1 - Full Genome 573,964,835 bp Contig true 2025-02-23 FTP / / / ////
    drMalDome10.1 GCA_916050505.1 - Full Genome 648,232,824 bp Chromosome true 2025-06-11 FTP / / / ////
    drMalDome11.1 GCA_916612005.1 - Full Genome 652,805,715 bp Chromosome true 2025-06-11 FTP / / / ////
    drMalDome11.1 alternate haplotype GCA_916614045.1 - Full Genome 587,620,589 bp Scaffold true 2025-02-23 FTP / / / ////
    drMalDome58.1 alternate haplotype GCA_916614085.1 - Full Genome 627,948,641 bp Contig true 2025-02-23 FTP / / / ////
    drMalDome58.1 GCA_916615275.1 - Full Genome 642,677,265 bp Chromosome true 2025-06-11 FTP / / / ////
    drMalDome5.2 alternate haplotype GCA_916614885.2 - Full Genome 575,601,101 bp Contig true 2025-02-23 FTP / / / ////
    PFR_Mdom_1.0 GCA_022606005.1 - Full Genome 754,684,250 bp Chromosome true 2023-11-16 FTP / / / ////
    drMalDome5.3 GCA_916615385.2 - Full Genome 647,358,101 bp Chromosome true 2025-02-23 FTP / / / ////
    drMalDome11.2 GCA_916612005.2 - Full Genome 653,365,208 bp Chromosome true 2025-02-23 FTP / / / ////
    drMalDome10.2 GCA_916050505.2 - Full Genome 648,800,799 bp Chromosome true 2025-02-23 FTP / / / ////
    drMalDome58.3 GCA_916615275.3 - Full Genome 643,199,345 bp Chromosome true 2024-09-14 FTP / / / ////
    Malus_domestica_Gala.pri GCA_028456005.1 - Full Genome 652,427,868 bp Chromosome true 2025-02-24 FTP / / / ////
    Malus_domestica_Gala.altA GCA_028456015.1 - Full Genome 657,696,253 bp Chromosome true 2025-02-24 FTP / / / ////
    Malus_domestica_Gala.altB GCA_028456065.1 - Full Genome 577,209,808 bp Chromosome true 2025-02-24 FTP / / / ////
    ASM3262894v1 GCA_032628945.1 - Full Genome 636,545,088 bp Chromosome true 2024-06-15 FTP / / / ////
    ASM3262892v1 GCA_032628925.1 - Full Genome 650,486,495 bp Chromosome true 2024-06-15 FTP / / / ////
    RA GCA_033882635.1 - Full Genome 662,148,500 bp Chromosome true 2025-07-03 FTP / / / ////
    HC GCA_033883015.1 - Full Genome 661,625,854 bp Chromosome true 2025-07-03 FTP / / / ////
    COP GCA_033882905.1 - Full Genome 668,008,064 bp Chromosome true 2025-07-03 FTP / / / ////
    JG GCA_033882935.1 - Full Genome 663,147,951 bp Chromosome true 2025-07-03 FTP / / / ////
    SD GCA_033882605.1 - Full Genome 662,013,873 bp Chromosome true 2025-07-03 FTP / / / ////
    OR GCA_033882625.1 - Full Genome 668,565,128 bp Chromosome true 2025-07-03 FTP / / / ////
    FJ GCA_033882645.1 - Full Genome 664,586,889 bp Chromosome true 2025-07-03 FTP / / / ////
    ASM3388340v1 GCA_033883405.1 - Full Genome 649,432,991 bp Chromosome true 2025-07-03 FTP / / / ////
    Fuji haplome B genome GCA_033962845.2 - Full Genome 671,417,745 bp Chromosome true 2025-07-03 FTP / / / ////
    Fuji haplome A genome GCA_033962815.2 - Full Genome 692,760,243 bp Chromosome true 2025-07-03 FTP / / / ////
    Fuji haploid consensus genome GCA_033963175.2 - Full Genome 736,926,135 bp Chromosome true 2025-07-03 FTP / / / ////
    ASM3450940v1 GCA_034509405.1 - Full Genome 711,570,603 bp Scaffold true 2025-06-07 FTP / / / ////
    ASM3730315v1 GCA_037303155.1 - Full Genome 648,338,598 bp Chromosome true 2025-06-26 FTP / / / ////
    ASM3731236v1 GCA_037312365.1 - Full Genome 651,978,723 bp Chromosome true 2025-06-26 FTP / / / ////
    drMalDome.wa38.v1.hapA GCA_041200035.1 - Full Genome 644,635,060 bp Chromosome true 2025-05-02 FTP / / / ////
    drMalDome.wa38.v1.hapB GCA_041200055.1 - Full Genome 651,850,698 bp Chromosome true 2025-05-02 FTP / / / ////
    GDT2T_hap1 GCA_042453785.1 GCF_042453785.1 Full Genome 651,332,481 bp Complete genome true 2025-05-01 FTP / / / FTP FTP FTP FTP
    Fuji_Del GCA_046056275.1 - Full Genome 658,723,542 bp Scaffold true 2025-05-02 FTP / / / ////
    Fuji_Ral GCA_046056345.1 - Full Genome 661,575,510 bp Scaffold true 2025-05-01 FTP / / / ////
    ASM4714224v1 GCA_047142245.1 - Full Genome 664,780,981 bp Contig true 2025-05-01 FTP / / / ////
    ASM4714233v1 GCA_047142335.1 - Full Genome 693,132,933 bp Contig true 2025-05-01 FTP / / / ////
    ASM4728441v1 GCA_047284415.1 - Full Genome 676,405,881 bp Chromosome true 2025-05-01 FTP / / / ////
    ASM4767589v1 GCA_047675895.1 - Full Genome 653,406,513 bp Chromosome true 2025-05-08 FTP / / / ////
    ASM4767590v1 GCA_047675905.1 - Full Genome 646,628,219 bp Chromosome true 2025-05-08 FTP / / / ////
    drMalDome5.1 alternate haplotype GCA_916614885.1 - Full Genome 575,613,174 bp Contig true 2025-05-22 FTP / / / ////
    drMalDome5.1 GCA_916615385.1 - Full Genome 646,790,116 bp Chromosome true 2025-05-22 FTP / / / ////
    drMalDome58.2 GCA_916615275.2 - Full Genome 642,631,360 bp Chromosome true 2025-05-22 FTP / / / ////
    Fuji_haploid_A GCA_033962815.1 - Full Genome 692,760,296 bp Chromosome true 2025-05-22 FTP / / / ////
    Fuji_haploid_B GCA_033962845.1 - Full Genome 671,417,745 bp Chromosome true 2025-05-22 FTP / / / ////
    Fuji_unphased GCA_033963175.1 - Full Genome 736,926,188 bp Chromosome true 2025-05-22 FTP / / / ////
    TropicalBeauty_h2 GCA_052938515.1 - Full Genome 656,799,476 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    TropicalBeauty_h1 GCA_052938535.1 - Full Genome 636,797,492 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Priscilla_h1 GCA_052938555.1 - Full Genome 656,012,943 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Priscilla_h2 GCA_052938575.1 - Full Genome 640,006,989 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    EdwardVII_h1 GCA_052938595.1 - Full Genome 651,885,145 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    EdwardVII_h2 GCA_052938615.1 - Full Genome 649,482,174 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    CoxsOrangePippin_h1 GCA_052938675.1 - Full Genome 651,562,139 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    CoxsOrangePippin_h2 GCA_052938685.1 - Full Genome 644,764,828 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    FiessersErstling_h1 GCA_052938715.1 - Full Genome 655,271,798 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    FiessersErstling_h2 GCA_052938735.1 - Full Genome 641,671,596 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Rouget_h1 GCA_052938935.1 - Full Genome 652,726,344 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    ScillyPearl_h1 GCA_052938915.1 - Full Genome 649,900,951 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    ScillyPearl_h2 GCA_052938925.1 - Full Genome 649,223,844 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Rouget_h2 GCA_052938975.1 - Full Genome 647,188,843 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Prima_h2 GCA_052938985.1 - Full Genome 640,670,118 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Prima_h1 GCA_052939015.1 - Full Genome 659,473,826 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    SQ159_h1 GCA_052939035.1 - Full Genome 651,434,953 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    SQ159_h2 GCA_052939045.1 - Full Genome 642,581,661 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Milwa_h1 GCA_052939075.1 - Full Genome 655,269,728 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Milwa_h2 GCA_052939095.1 - Full Genome 640,838,162 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    McIntosh_h1 GCA_052939115.1 - Full Genome 656,826,471 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    McIntosh_h2 GCA_052939125.1 - Full Genome 646,035,107 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Braeburn_h1 GCA_052939155.1 - Full Genome 676,548,961 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Braeburn_h2 GCA_052939175.1 - Full Genome 592,406,660 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Kitchkova_h1 GCA_052939185.1 - Full Genome 662,227,836 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Kitchkova_h2 GCA_052939215.1 - Full Genome 649,794,916 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Jonathan_h2 GCA_052939235.1 - Full Genome 648,630,354 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Jonathan_h1 GCA_052939245.1 - Full Genome 649,111,831 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    GrannySmith_h1 GCA_052939275.1 - Full Genome 652,822,941 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    GrannySmith_h2 GCA_052939295.1 - Full Genome 645,156,622 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    GigaIpador_h1 GCA_052939315.1 - Full Genome 667,721,472 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    GigaIpador_h2 GCA_052939335.1 - Full Genome 644,742,385 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Giambun_h1 GCA_052939355.1 - Full Genome 650,464,663 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Giambun_h2 GCA_052939365.1 - Full Genome 644,677,071 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    EsopusSpritzenburg_h1 GCA_052939395.1 - Full Genome 652,656,407 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Enterprise_h1 GCA_052939425.1 - Full Genome 654,280,620 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    EsopusSpritzenburg_h2 GCA_052939415.1 - Full Genome 645,902,418 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    Enterprise_h2 GCA_052939435.1 - Full Genome 647,230,618 bp Chromosome true 2025-10-05 FTP FTP FTP FTP ////
    ASM5999576v1 GCA_059995765.1 - Full Genome 640,920,084 bp Chromosome true 2026-08-26 FTP / / / ////
    ASM5999577v1 GCA_059995775.1 - Full Genome 641,201,727 bp Chromosome true 2026-08-23 FTP / / / ////
    Description: