- Scientific Name
- Oryza sativa
- Common Names
- red rice, rice; Asian cultivated rice;
- Bioproject
- PRJCA017583
- Biosample
- SAMC1304011
- Accession No.
- GWHDIXQ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 18,166,415 (SNP), 952,283 (Indel)
- Submitter Organization
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences
- Contact
- Dai Rui, raydai@genetics.ac.cn
- Sequence author(s)
- Dai Rui
- Released Date
- 2025-06-26
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SPAdes 3.14.0
- Sequencing & coverage
- Illumina NovaSeq 6000 262.2948452
- Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDIXQ00000000 | - | Iso_Rc_R2565 | Draft genome in scaffold level | 2025-06-26 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 6,009,181 |
| GC content | 70.39% |
| Scaffold sequence No. | 46 |
| Maximum scaffold sequence length (bp) | 1,306,670 |
| Minimum scaffold sequence length (bp) | 1,068 |
| Average scaffold sequence length (bp) | 130,634 |
| Scaffold N50 (bp) | 1,062,928 |
| Scaffold N90 (bp) | 263,326 |