- Scientific Name
- Swietenia macrophylla
- Common Names
- -
- Bioproject
- PRJCA018269
- Biosample
- SAMC2911705
- Accession No.
- GWHDONZ00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR820104
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Agricultural Genomics, BGI-Shenzhen, BGI
- Contact
- liu min, liumin4@genomics.cn
- Sequence author(s)
- sunil sahu
- Released Date
- 2023-08-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- supernova v 2.1.1
- Sequencing & coverage
- 10XGenomics 93.4
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Sunil Kumar Sahu, et al. Chromosome-scale genomes of commercially important mahoganies, Swietenia macrophylla and Khaya senegalensis. Scientific Data. 2023, 10(1): 832.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDONZ00000000 | - | Swietenia_macrophylla.fa | Draft genome in scaffold level | 2023-08-08 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 290,208,927 |
| GC content | 33.06% |
| Scaffold sequence No. | 19,971 |
| Maximum scaffold sequence length (bp) | 15,468,293 |
| Minimum scaffold sequence length (bp) | 200 |
| Average scaffold sequence length (bp) | 14,532 |
| Scaffold N50 (bp) | 5,758,776 |
| Scaffold N90 (bp) | 9,569 |