- Scientific Name
- Khaya senegalensis
- Common Names
- -
- Bioproject
- PRJCA018269
- Biosample
- SAMC2911706
- Accession No.
- GWHDOOA00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR820105
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Agricultural Genomics, BGI-Shenzhen, BGI
- Contact
- liu min, liumin4@genomics.cn
- Sequence author(s)
- sunil sahu
- Released Date
- 2023-08-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- supernova v 2.1.1
- Sequencing & coverage
- 10XGenomics 92.2
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Sunil Kumar Sahu, et al. Chromosome-scale genomes of commercially important mahoganies, Swietenia macrophylla and Khaya senegalensis. Scientific Data. 2023, 10(1): 832.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDOOA00000000 | - | Khaya_senegalensis.fa | Draft genome in scaffold level | 2023-08-08 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 377,763,054 |
| GC content | 32.90% |
| Scaffold sequence No. | 54,771 |
| Maximum scaffold sequence length (bp) | 11,110,421 |
| Minimum scaffold sequence length (bp) | 200 |
| Average scaffold sequence length (bp) | 6,897 |
| Scaffold N50 (bp) | 2,533,462 |
| Scaffold N90 (bp) | 3,549 |