- Scientific Name
- Morus alba var. atropurpurea
- Common Names
- Morus atropurpurea
- Bioproject
- PRJCA018235
- Biosample
- SAMC2923731
- Accession No.
- GWHDOOP00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Resource Insects, Institute of Sericulture and Systems Biology, Southwest University
- Contact
- Aichun Zhao, zhaoaichun@swu.edu.cn
- Sequence author(s)
- Aichun Zhao
- Released Date
- 2023-10-31
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.16.1-r375
- Sequencing & coverage
- PacBio Sequel II 98.0
Illumina HiSeq 80.0
Illumina HiSeqPE150 118.0 - Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Zhongqiang Xia, et al. Haplotype-resolved chromosomal-level genome assembly reveals regulatory variations in mulberry fruit anthocyanin content. Horticulture Research. 2024, 11(6): uhae120.
Statistics of Genome Assembly
| Genome size (bp) | 293,602,840 |
| GC content | 34.67% |
| Chromosomes sequence No. | 14 |
| Genome sequence No. | 112 |
| Maximum genome sequence length (bp) | 46,989,051 |
| Minimum genome sequence length (bp) | 1,000 |
| Average genome sequence length (bp) | 2,621,454 |
| Genome sequence N50 (bp) | 20,594,731 |
| Genome sequence N90 (bp) | 14,841,014 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 23,893 | 23,893 |
| Others | 169 | 169 |
| Total | 24,062 | 24,062 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 1,803 | 1,803 |
| chr10 | 1,764 | 1,764 |
| chr11 | 1,709 | 1,709 |
| chr12 | 1,455 | 1,455 |
| chr13 | 1,344 | 1,344 |
| chr14 | 1,446 | 1,446 |
| chr2 | 1,392 | 1,392 |
| chr3 | 1,434 | 1,434 |
| chr4 | 2,030 | 2,030 |
| chr5 | 2,198 | 2,198 |
| chr6 | 2,168 | 2,168 |
| chr7 | 2,041 | 2,041 |
| chr8 | 1,480 | 1,480 |
| chr9 | 1,629 | 1,629 |
| Others | 169 | 169 |
| Total | 24,062 | 24,062 |