- Scientific Name
- Morus alba var. atropurpurea
- Common Names
- Morus atropurpurea
- Bioproject
- PRJCA018235
- Biosample
- SAMC2923732
- Accession No.
- GWHDOOT00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Resource Insects, Institute of Sericulture and Systems Biology, Southwest University
- Contact
- Aichun Zhao, zhaoaichun@swu.edu.cn
- Sequence author(s)
- Aichun Zhao
- Released Date
- 2023-10-31
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.16.1-r375
- Sequencing & coverage
- PacBio Sequel II 98.0
Illumina HiSeq 80.0
Illumina HiSeqPE150 118.0 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Zhongqiang Xia, et al. Haplotype-resolved chromosomal-level genome assembly reveals regulatory variations in mulberry fruit anthocyanin content. Horticulture Research. 2024, 11(6): uhae120.
Statistics of Genome Assembly
| Genome size (bp) | 302,793,285 |
| GC content | 34.78% |
| Chromosomes sequence No. | 14 |
| Genome sequence No. | 90 |
| Maximum genome sequence length (bp) | 50,636,964 |
| Minimum genome sequence length (bp) | 1,000 |
| Average genome sequence length (bp) | 3,364,370 |
| Genome sequence N50 (bp) | 20,756,000 |
| Genome sequence N90 (bp) | 15,043,000 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 24,050 | 24,050 |
| Others | 204 | 204 |
| Total | 24,254 | 24,254 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 1,855 | 1,855 |
| chr10 | 1,745 | 1,745 |
| chr11 | 1,721 | 1,721 |
| chr12 | 1,422 | 1,422 |
| chr13 | 1,359 | 1,359 |
| chr14 | 1,427 | 1,427 |
| chr2 | 1,492 | 1,492 |
| chr3 | 1,433 | 1,433 |
| chr4 | 2,035 | 2,035 |
| chr5 | 2,357 | 2,357 |
| chr6 | 2,092 | 2,092 |
| chr7 | 2,006 | 2,006 |
| chr8 | 1,491 | 1,491 |
| chr9 | 1,615 | 1,615 |
| Others | 204 | 204 |
| Total | 24,254 | 24,254 |