- Scientific Name
- Macaca mulatta
- Common Names
- rhesus macaque, rhesus macaques, rhesus monkeys; Rhesus monkey;
- Bioproject
- PRJCA001197
- Biosample
- SAMC053454
- Accession No.
- GWHAAIE00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR071918, CRR071917, CRR071916, CRR071915, CRR071914, more
- GVM variations of the species
- 86,413,849 (SNP), 12,071,060 (Indel)
- Submitter Organization
- State Key lab of Genetic resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
- Contact
- Yaoxi He, heyaoxi@mail.kiz.ac.cn
- Sequence author(s)
- Yaoxi He
- Released Date
- 2019-10-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- PacBio+multi-scaffolding FALCON
- Sequencing & coverage
- PacBio 100.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Yaoxi He, et al. Long-read assembly of the Chinese rhesus macaque genome and identification of ape-specific structural variants. Nature Communications. 2019, 10(1):4233.
Statistics of Genome Assembly
| Genome size (bp) | 2,955,490,605 |
| GC content | 41.01% |
| Genome sequence No. | 22 |
| Maximum genome sequence length (bp) | 227,617,462 |
| Minimum genome sequence length (bp) | 13,055,603 |
| Average genome sequence length (bp) | 134,340,482 |
| Genome sequence N50 (bp) | 152,195,021 |
| Genome sequence N90 (bp) | 89,280,157 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 20,255 | 20,255 |