- Scientific Name
- Sus scrofa
- Common Names
- pigs, swine, wild boar; pig;
- Bioproject
- PRJCA019609
- Biosample
- SAMC3056885
- Accession No.
- GWHDTXD00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 90,901,492 (SNP), 12,087,428 (Indel)
- Submitter Organization
- College of Animal Science and Technology, China Agricultural University
- Contact
- Jian-Feng Liu, liujf@cau.edu.cn
- Sequence author(s)
- Jian-Feng Liu
- Released Date
- 2024-07-22
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Falcon v2018.03.12
- Sequencing & coverage
- PacBio Sequel II 60.0
- Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDTXD00000000 | - | CAU-MOE-LW | Draft genome in chromosome level | 2024-07-22 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,504,023,956 |
| GC content | 41.82% |
| Chromosomes sequence No. | 20 |
| Genome sequence No. | 1,189 |
| Maximum genome sequence length (bp) | 279,108,156 |
| Minimum genome sequence length (bp) | 11,944 |
| Average genome sequence length (bp) | 2,105,992 |
| Genome sequence N50 (bp) | 137,131,116 |
| Genome sequence N90 (bp) | 65,119,466 |