- Scientific Name
- Sus scrofa
- Common Names
- pigs, swine, wild boar; pig;
- Bioproject
- PRJCA019609
- Biosample
- SAMC3056887
- Accession No.
- GWHDTXM00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 90,901,492 (SNP), 12,087,428 (Indel)
- Submitter Organization
- College of Animal Science and Technology, China Agricultural University
- Contact
- Jian-Feng Liu, liujf@cau.edu.cn
- Sequence author(s)
- Jian-Feng Liu
- Released Date
- 2024-07-22
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Falcon v2018.03.12
- Sequencing & coverage
- PacBio Sequel II 60.0
- Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDTXM00000000 | - | CAU-MOE-TC | Draft genome in chromosome level | 2024-07-22 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,604,359,205 |
| GC content | 42.20% |
| Chromosomes sequence No. | 20 |
| Genome sequence No. | 1,393 |
| Maximum genome sequence length (bp) | 280,951,064 |
| Minimum genome sequence length (bp) | 10,756 |
| Average genome sequence length (bp) | 1,869,605 |
| Genome sequence N50 (bp) | 140,057,371 |
| Genome sequence N90 (bp) | 62,463,808 |