Genome Warehouse

Scientific Name: Brassica rapa
Common Names: field mustard;
Bioproject: PRJCA001831
Biosample: SAMC111303
Accession No.: GWHAAZY00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: 11,856,138 (SNP), 4,322,343 (Indel)
Submitter Organization: Molecular and genetic Lab, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences
Contact: Xiaowu Wang, wangxiaowu@caas.cn
Sequence author(s): Xiaowu Wang
Released Date: 2021-09-28
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: MaSuRCA 3.2.6
Sequencing & coverage: Illumina HiSeq 2500 44.34
PacBio 38.39
Download: DNA GFF RNA CDS Protein
Publication(s): Xu Cai, et al. Impacts of allopolyploidization and structural variation on intraspecificdiversification in Brassica rapa. Genome Biology. 2021, 22.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHAAZY00000000	-	OIB	Draft genome in chromosome level	2021-09-28	DNA GFF RNA CDS Protein

Genome size (bp)	354,407,496
GC content	36.68%
Genome sequence No.	2,484
Maximum genome sequence length (bp)	43,122,453
Minimum genome sequence length (bp)	1,175
Average genome sequence length (bp)	142,676
Genome sequence N50 (bp)	27,978,300
Genome sequence N90 (bp)	46,784

Annotation of Whole Genome Assembly

	Protein	Total
Total	47,327	47,327