- Scientific Name
- Brachypodium
- Common Names
- false bromes;
- Bioproject
- PRJCA017149
- Biosample
- SAMC1255399
- Accession No.
- GWHDUCW00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR789937
- GVM variations of the species
- -
- Submitter Organization
- National Key Laboratory of Crop Genetic Improvement, National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University
- Contact
- Handong Su(shandong@mail.hzau.edu.cn)
- Sequence author(s)
- Handong Su, Chuanye Chen, Siying Wu
- Released Date
- 2024-02-09
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.16.1-r375
- Sequencing & coverage
- PacBio 74.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Chuanye Chen, et al. Three near-complete genome assemblies reveal substantial centromere dynamics from diploid to tetraploid in Brachypodium genus. Genome Biology. 2024, 25(1): 63.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDUCW00000000 | - | IBd483 | Draft genome in chromosome level | 2024-02-09 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 535,099,749 |
| GC content | 46.05% |
| Chromosomes sequence No. | 10 |
| Genome sequence No. | 15 |
| Maximum genome sequence length (bp) | 75,389,492 |
| Minimum genome sequence length (bp) | 20,862,597 |
| Average genome sequence length (bp) | 35,673,317 |
| Genome sequence N50 (bp) | 32,250,776 |
| Genome sequence N90 (bp) | 22,514,701 |