Genome Warehouse

Scientific Name: Ficus microcarpa
Common Names: curtain fig, Indian laurel fig, laurel fig, Malay banyan;
Bioproject: PRJCA002187
Biosample: SAMC134150
Accession No.: GWHABKV00000000.1
GWH reannotation accession: -
GSA raw reads: CRR196941
GVM variations of the species: -
Submitter Organization: Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University
Contact: Xingtan Zhang, zhangxt@fafu.edu.cn
Sequence author(s): Xingtan Zhang
Released Date: 2020-08-21
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: smartdenovo 2018-02-19
falcon 0.5
quickmerge 2016-07-21
Sequencing & coverage: PacBio 86.5
Illumina X10 76.37
Download: DNA GFF RNA CDS Protein
Publication(s): Xingtan Zhang, et al. Genomes of the Banyan Tree and Pollinator Wasp Provide Insights into Fig-Wasp Coevolution. Cell. 2020.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHABKV00000000	-	Fmicrocarpa-2020	Draft genome in chromosome level	2020-08-21	DNA GFF RNA CDS Protein
GWHABKV00000000.1	-	Fm_v2	Draft genome in chromosome level	2020-08-21	DNA GFF RNA CDS Protein

Genome size (bp)	426,563,229
GC content	34.33%
Chromosomes sequence No.	13
Genome sequence No.	738
Maximum genome sequence length (bp)	57,014,673
Minimum genome sequence length (bp)	2,000
Average genome sequence length (bp)	577,999
Genome sequence N50 (bp)	29,290,112
Genome sequence N90 (bp)	22,471,607

Annotation of Whole Genome Assembly

Annotation Details