- Scientific Name
- Sorghum bicolor
- Common Names
- broomcorn, milo; sorghum; Andropogon sorghum, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum saccharatum, Sorghum vulgare
- Bioproject
- PRJCA020935
- Biosample
- SAMC3142648
- Accession No.
- GWHEQHW00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR932692
- GVM variations of the species
- 60,024,602 (SNP), 9,992,120 (Indel)
- Submitter Organization
- -, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences
- Contact
- jiandong Bao, baojd@zaas.ac.cn
- Sequence author(s)
- jiandong Bao
- Released Date
- 2023-11-16
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 0.19.7-r598
- Sequencing & coverage
- PacBio 29.0
ONT 19.0
HiC 104.0 - Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 726,888,120 |
| GC content | 43.93% |
| Chromosomes sequence No. | 10 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 47,203 | 47,203 |
| Total | 47,203 | 47,203 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 7,260 | 7,260 |
| chr10 | 4,121 | 4,121 |
| chr2 | 6,148 | 6,148 |
| chr3 | 6,140 | 6,140 |
| chr4 | 5,106 | 5,106 |
| chr5 | 3,922 | 3,922 |
| chr6 | 4,061 | 4,061 |
| chr7 | 3,587 | 3,587 |
| chr8 | 3,130 | 3,130 |
| chr9 | 3,728 | 3,728 |
| Total | 47,203 | 47,203 |