- Scientific Name
- Sorghum bicolor
- Common Names
- broomcorn, milo; sorghum; Andropogon sorghum, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum saccharatum, Sorghum vulgare
- Bioproject
- PRJCA020935
- Biosample
- SAMC3142647
- Accession No.
- GWHEQHX00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR932688
- GVM variations of the species
- 60,024,602 (SNP), 9,992,120 (Indel)
- Submitter Organization
- -, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences
- Contact
- jiandong Bao, baojd@zaas.ac.cn
- Sequence author(s)
- jiandong Bao
- Released Date
- 2023-11-16
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 0.19.7-r598
- Sequencing & coverage
- PacBio HiFi 31.0
UL-ONT 22.0
HiC 81.0 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 724,366,872 |
| GC content | 43.87% |
| Chromosomes sequence No. | 10 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 46,525 | 46,525 |
| Total | 46,525 | 46,525 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 7,156 | 7,156 |
| chr10 | 4,031 | 4,031 |
| chr2 | 5,988 | 5,988 |
| chr3 | 6,028 | 6,028 |
| chr4 | 5,054 | 5,054 |
| chr5 | 3,843 | 3,843 |
| chr6 | 4,008 | 4,008 |
| chr7 | 3,518 | 3,518 |
| chr8 | 3,239 | 3,239 |
| chr9 | 3,660 | 3,660 |
| Total | 46,525 | 46,525 |