Scientific Name
Microtus fortis
Common Names
reed vole; Alexandromys fortis
Bioproject
PRJCA024522
Biosample
SAMC3457404
Accession No.
GWHESEF00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
Department of laboratory Animals, Central South University
Contact
zhijun zhou, zhouzhijun@csu.edu.cn
Sequence author(s)
du zhang, qi hu
Released Date
2025-09-20
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
OLC(Overlap Layout Consensus) hifiasm(Version: 0.16.1)
Sequencing & coverage
Illumina Genome Analyzer II 84.5
PacBio 84.5
Download
DNA GFF RNA CDS Protein
Publication(s)
-
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHESEF00000000 - MF_2023 Draft genome in chromosome level 2025-09-20 DNA GFF RNA CDS Protein

Statistics of Genome Assembly

Genome size (bp) 2,286,498,262
GC content 42.48%
Chromosomes sequence No. 26
Genome sequence No. 88
Maximum genome sequence length (bp) 132,712,573
Minimum genome sequence length (bp) 30,217
Average genome sequence length (bp) 25,982,935
Genome sequence N50 (bp) 91,234,584
Genome sequence N90 (bp) 63,503,454
Annotation of Whole Genome Assembly
Protein Total
Chromosome 23,976 23,976
Others 71 71
Total 24,047 24,047
Annotation Details
ChrID Protein Total
chr1 1,530 1,530
chr10 1,203 1,203
chr11 826 826
chr12 875 875
chr13 1,071 1,071
chr14 656 656
chr15 703 703
chr16 597 597
chr17 600 600
chr18 524 524
chr19 655 655
chr2 1,267 1,267
chr20 549 549
chr21 816 816
chr22 720 720
chr23 759 759
chr24 611 611
chr25 338 338
chr3 972 972
chr4 934 934
chr5 1,730 1,730
chr6 1,481 1,481
chr7 928 928
chr8 1,398 1,398
chr9 947 947
chrX 1,286 1,286
Others 71 71
Total 24,047 24,047