- Scientific Name
- Malus domestica
- Common Names
- apple tree, cultivated apple; apple; Malus communis, Malus pumila auct., Malus pumila var. domestica, Malus sylvestris var. domestica, Malus x domestica, Pyrus malus, Pyrus malus var. domestica
- Bioproject
- PRJCA024962
- Biosample
- SAMC3514003
- Accession No.
- GWHESFA00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 80,507,572 (SNP), 11,854,944 (Indel)
- Submitter Organization
- College of Horticulture, Northwest A&F University
- Contact
- Jiangping Mao(mjp588@nwafu.edu.cn)
- Sequence author(s)
- Jiangping Mao
- Released Date
- 2024-10-30
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.19.5-r587
- Sequencing & coverage
- PacBio 155.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHESFA00000000 | - | Fuji_Ral | Draft genome in chromosome level | 2024-10-30 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 661,575,510 |
| GC content | 38.32% |
| Chromosomes sequence No. | 13 |
| Genome sequence No. | 54 |
| Maximum genome sequence length (bp) | 56,400,784 |
| Minimum genome sequence length (bp) | 38,089 |
| Average genome sequence length (bp) | 12,251,398 |
| Genome sequence N50 (bp) | 37,296,909 |
| Genome sequence N90 (bp) | 31,517,569 |