- Scientific Name
- Lobularia maritima
- Common Names
- sweet alyssum; Alyssum maritimum
- Bioproject
- PRJCA002888
- Biosample
- SAMC195201
- Accession No.
- GWHANWC00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Life Sciences, Sichuan University
- Contact
- Li Huang, 1003882358@qq.com
- Sequence author(s)
- Li Huang
- Released Date
- 2020-12-21
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- 3D-DNA pipeline and Juicer pipeline v1.6.2
- Sequencing & coverage
- Illumina HiSeq 2500 108.76
- Download
-
DNA
GFF
RNA
Protein
- Publication(s)
- Li Huang, et al. A chromosome-scale reference genome of Lobularia maritima, an ornamental plant with high stress tolerance. Horticulture Research. 2020, 7: 197.
Statistics of Genome Assembly
| Genome size (bp) | 197,688,650 |
| GC content | 36.02% |
| Genome sequence No. | 27,734 |
| Maximum genome sequence length (bp) | 16,503,592 |
| Minimum genome sequence length (bp) | 200 |
| Average genome sequence length (bp) | 7,128 |
| Genome sequence N50 (bp) | 14,943,599 |
| Genome sequence N90 (bp) | 25,743 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 25,813 | 25,813 |