- Scientific Name
- Trachinotus anak
- Common Names
- oyster pompano;
- Bioproject
- PRJCA042885
- Haplotype bioproject
- PRJCA042869
- Biosample
- SAMC5622639
- Accession No.
- GWHGEPT00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1985738
- GVM variations of the species
- -
- Submitter Organization
- Fisheries College, Guangdong Ocean University
- Contact
- Tao Wang, wangtao01@gdou.edu.cn
- Sequence author(s)
- Tao Wang
- Released Date
- 2025-07-11
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 0.19.9-r616
- Sequencing & coverage
- Oxford Nanopore PromethION 85.72
PacBio Revio 137.54
DNBSEQ-T7 158.46 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 663,775,623 |
| GC content | 41.15% |
| Chromosomes sequence No. | 24 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 24,977 | 24,977 |
| Total | 24,977 | 24,977 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chrA1 | 1,016 | 1,016 |
| chrA10 | 953 | 953 |
| chrA11 | 1,021 | 1,021 |
| chrA12 | 1,198 | 1,198 |
| chrA13 | 1,092 | 1,092 |
| chrA14 | 1,027 | 1,027 |
| chrA15 | 874 | 874 |
| chrA16 | 1,283 | 1,283 |
| chrA17 | 1,001 | 1,001 |
| chrA18 | 954 | 954 |
| chrA19 | 900 | 900 |
| chrA2 | 1,261 | 1,261 |
| chrA20 | 749 | 749 |
| chrA21 | 958 | 958 |
| chrA22 | 944 | 944 |
| chrA23 | 687 | 687 |
| chrA24 | 718 | 718 |
| chrA3 | 1,326 | 1,326 |
| chrA4 | 1,213 | 1,213 |
| chrA5 | 1,281 | 1,281 |
| chrA6 | 1,077 | 1,077 |
| chrA7 | 1,068 | 1,068 |
| chrA8 | 1,220 | 1,220 |
| chrA9 | 1,156 | 1,156 |
| Total | 24,977 | 24,977 |