- Scientific Name
- Trachinotus anak
- Common Names
- oyster pompano;
- Bioproject
- PRJCA042885
- Haplotype bioproject
- PRJCA042884
- Biosample
- SAMC5622639
- Accession No.
- GWHGEPU00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1985738
- GVM variations of the species
- -
- Submitter Organization
- Fisheries College, Guangdong Ocean University
- Contact
- Tao Wang, wangtao01@gdou.edu.cn
- Sequence author(s)
- Tao Wang
- Released Date
- 2025-07-11
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 0.19.9-r616
- Sequencing & coverage
- Oxford Nanopore PromethION 85.72
PacBio Revio 137.54
DNBSEQ-T7 158.46 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 661,090,596 |
| GC content | 41.13% |
| Chromosomes sequence No. | 24 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 25,706 | 25,706 |
| Total | 25,706 | 25,706 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chrB1 | 1,038 | 1,038 |
| chrB10 | 1,015 | 1,015 |
| chrB11 | 1,060 | 1,060 |
| chrB12 | 1,235 | 1,235 |
| chrB13 | 1,099 | 1,099 |
| chrB14 | 1,077 | 1,077 |
| chrB15 | 872 | 872 |
| chrB16 | 1,319 | 1,319 |
| chrB17 | 1,043 | 1,043 |
| chrB18 | 987 | 987 |
| chrB19 | 944 | 944 |
| chrB2 | 1,308 | 1,308 |
| chrB20 | 751 | 751 |
| chrB21 | 989 | 989 |
| chrB22 | 922 | 922 |
| chrB23 | 684 | 684 |
| chrB24 | 686 | 686 |
| chrB3 | 1,375 | 1,375 |
| chrB4 | 1,291 | 1,291 |
| chrB5 | 1,316 | 1,316 |
| chrB6 | 1,127 | 1,127 |
| chrB7 | 1,119 | 1,119 |
| chrB8 | 1,272 | 1,272 |
| chrB9 | 1,177 | 1,177 |
| Total | 25,706 | 25,706 |