- Scientific Name
- Pelodiscus sinensis
- Common Names
- Chinese softshell turtle; Chinese soft-shelled turtle; Trionyx sinensis
- Bioproject
- PRJCA044196
- Biosample
- SAMC5749356
- Accession No.
- GWHGGEN00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- college of fisheries, Hunan Agricultural University
- Contact
- Zhe Li, lzyzy0515@163.com
- Sequence author(s)
- Zhe Li
- Released Date
- 2025-09-01
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.19.9-r616
- Sequencing & coverage
- HiFi 60
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 2,266,984,135 |
| GC content | 45.81% |
| Chromosomes sequence No. | 34 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 50,835 | 50,835 |
| Total | 50,835 | 50,835 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 6,659 | 6,659 |
| chr10 | 1,323 | 1,323 |
| chr11 | 1,413 | 1,413 |
| chr12 | 1,119 | 1,119 |
| chr13 | 958 | 958 |
| chr14 | 1,183 | 1,183 |
| chr15 | 1,154 | 1,154 |
| chr16 | 1,028 | 1,028 |
| chr17 | 1,013 | 1,013 |
| chr18 | 1,269 | 1,269 |
| chr19 | 1,196 | 1,196 |
| chr2 | 4,173 | 4,173 |
| chr20 | 894 | 894 |
| chr21 | 863 | 863 |
| chr22 | 1,492 | 1,492 |
| chr23 | 876 | 876 |
| chr24 | 731 | 731 |
| chr25 | 522 | 522 |
| chr26 | 746 | 746 |
| chr27 | 798 | 798 |
| chr28 | 564 | 564 |
| chr29 | 716 | 716 |
| chr3 | 3,541 | 3,541 |
| chr30 | 688 | 688 |
| chr31 | 1,124 | 1,124 |
| chr32 | 818 | 818 |
| chr4 | 2,549 | 2,549 |
| chr5 | 3,329 | 3,329 |
| chr6 | 2,207 | 2,207 |
| chr7 | 1,645 | 1,645 |
| chr8 | 1,506 | 1,506 |
| chr9 | 1,591 | 1,591 |
| chrW | 141 | 141 |
| chrZ | 1,006 | 1,006 |
| Total | 50,835 | 50,835 |