This sample is a genetically modified line, and it was constructed using the pOX expression system.
- Scientific Name
- Carica papaya
- Common Names
- mamon; papaya;
- Bioproject
- PRJCA036247
- Haplotype bioproject
- PRJCA044469
- Biosample
- SAMC5759619
- Accession No.
- GWHGGGT00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University
- Contact
- Yihan Tong, t13476018526@gmail.com
- Sequence author(s)
- Jingjing Yue
- Released Date
- 2025-08-14
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.24.0-r702
- Sequencing & coverage
- PacBio Sequel IIe 30
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 334,768,680 |
| GC content | 35.68% |
| Chromosomes sequence No. | 9 |
| Genome sequence No. | 22 |
| Maximum genome sequence length (bp) | 46,581,379 |
| Minimum genome sequence length (bp) | 27,925 |
| Average genome sequence length (bp) | 15,216,758 |
| Genome sequence N50 (bp) | 36,752,930 |
| Genome sequence N90 (bp) | 30,339,248 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 20,372 | 20,372 |
| Others | 72 | 72 |
| Total | 20,444 | 20,444 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 2,741 | 2,741 |
| chr2 | 2,564 | 2,564 |
| chr3 | 2,450 | 2,450 |
| chr4 | 2,341 | 2,341 |
| chr5 | 2,131 | 2,131 |
| chr6 | 2,258 | 2,258 |
| chr7 | 2,077 | 2,077 |
| chr8 | 1,887 | 1,887 |
| chr9 | 1,923 | 1,923 |
| Others | 72 | 72 |
| Total | 20,444 | 20,444 |