This sample is a genetically modified line, and it was constructed using the pOX expression system.
- Scientific Name
- Carica papaya
- Common Names
- mamon; papaya;
- Bioproject
- PRJCA036247
- Haplotype bioproject
- PRJCA044470
- Biosample
- SAMC5759619
- Accession No.
- GWHGGGU00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University
- Contact
- Yihan Tong, t13476018526@gmail.com
- Sequence author(s)
- Jingjing Yue
- Released Date
- 2025-08-14
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.24.0-r702
- Sequencing & coverage
- PacBio Sequel IIe 30
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 329,147,594 |
| GC content | 35.50% |
| Chromosomes sequence No. | 9 |
| Genome sequence No. | 20 |
| Maximum genome sequence length (bp) | 46,795,984 |
| Minimum genome sequence length (bp) | 31,630 |
| Average genome sequence length (bp) | 16,457,380 |
| Genome sequence N50 (bp) | 35,696,216 |
| Genome sequence N90 (bp) | 32,643,395 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 20,388 | 20,388 |
| Others | 41 | 41 |
| Total | 20,429 | 20,429 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 2,754 | 2,754 |
| chr2 | 2,579 | 2,579 |
| chr3 | 2,414 | 2,414 |
| chr4 | 2,376 | 2,376 |
| chr5 | 2,156 | 2,156 |
| chr6 | 2,262 | 2,262 |
| chr7 | 2,062 | 2,062 |
| chr8 | 1,899 | 1,899 |
| chr9 | 1,886 | 1,886 |
| Others | 41 | 41 |
| Total | 20,429 | 20,429 |