This sample is a genetically modified line, and it was constructed using the pOX expression system.
- Scientific Name
- Carica papaya
- Common Names
- mamon; papaya;
- Bioproject
- PRJCA036247
- Biosample
- SAMC5750684
- Accession No.
- GWHGGIA00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University
- Contact
- Jingjing Yue, zxb344@126.com
- Sequence author(s)
- Jingjing Yue
- Released Date
- 2025-08-15
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.24.0-r702
- Sequencing & coverage
- PacBio Sequel IIe 30
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 335,239,245 |
| GC content | 35.58% |
| Chromosomes sequence No. | 10 |
| Genome sequence No. | 192 |
| Maximum genome sequence length (bp) | 43,934,526 |
| Minimum genome sequence length (bp) | 852 |
| Average genome sequence length (bp) | 1,746,038 |
| Genome sequence N50 (bp) | 35,395,780 |
| Genome sequence N90 (bp) | 27,364,782 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 19,085 | 19,085 |
| Total | 19,085 | 19,085 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 2,172 | 2,172 |
| chr2 | 2,380 | 2,380 |
| chr3 | 2,283 | 2,283 |
| chr4 | 2,221 | 2,221 |
| chr5 | 2,068 | 2,068 |
| chr6 | 2,187 | 2,187 |
| chr7 | 1,987 | 1,987 |
| chr8 | 1,794 | 1,794 |
| chr9 | 1,789 | 1,789 |
| chrY | 204 | 204 |
| Total | 19,085 | 19,085 |