- Scientific Name
- Bombus breviceps
- Common Names
- Bombus dentatus
- Bioproject
- PRJCA002292
- Biosample
- SAMC143387
- Accession No.
- GWHACBI00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR121615
- GVM variations of the species
- -
- Submitter Organization
- -, Institute of Apicultural Research, Chinese Academy of Agricultural Sciences
- Contact
- Cheng Sun(suncheng@caas.cn)
- Sequence author(s)
- Cheng Sun
- Released Date
- 2020-09-17
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- DISCOVAR de novo 52488
BESST 2.2.6 - Sequencing & coverage
- Illumina HiSeq 2500 100.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHACBI00000000 | - | B.breviceps Scaffolds | Draft genome in scaffold level | 2020-09-17 |
DNA
GFF
RNA
CDS
Protein
|
| GWHACBI00000000.1 | - | BbreChr | Draft genome in chromosome level | 2020-09-21 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 246,375,854 |
| GC content | 37.73% |
| Scaffold sequence No. | 4,724 |
| Maximum scaffold sequence length (bp) | 11,158,591 |
| Minimum scaffold sequence length (bp) | 1,000 |
| Average scaffold sequence length (bp) | 52,154 |
| Scaffold N50 (bp) | 4,053,881 |
| Scaffold N90 (bp) | 632,527 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 16,904 | 16,904 |