- Scientific Name
- Bombus confusus
- Common Names
- Bombus paradoxus
- Bioproject
- PRJCA002292
- Biosample
- SAMC143378
- Accession No.
- GWHACBR00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR121590
- GVM variations of the species
- -
- Submitter Organization
- -, Institute of Apicultural Research, Chinese Academy of Agricultural Sciences
- Contact
- Cheng Sun(suncheng@caas.cn)
- Sequence author(s)
- Cheng Sun
- Released Date
- 2020-09-28
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- DISCOVAR de novo 52488
BESST 2.2.6 - Sequencing & coverage
- Illumina HiSeq 2500 100.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Cheng Sun, et al. Genus-wide characterization of bumblebee genomes provides insights into their evolution and variation in ecological and behavioral traits. Molecular Biology and Evolution. 2020.
Statistics of Genome Assembly
| Genome size (bp) | 239,101,172 |
| GC content | 38.83% |
| Scaffold sequence No. | 4,639 |
| Maximum scaffold sequence length (bp) | 14,733,763 |
| Minimum scaffold sequence length (bp) | 1,000 |
| Average scaffold sequence length (bp) | 51,542 |
| Scaffold N50 (bp) | 3,260,211 |
| Scaffold N90 (bp) | 538,832 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 14,027 | 14,027 |