- Scientific Name
- Oryza sativa Japonica Group
- Common Names
- Japonica rice; Japanese rice; Oryza sativa (japonica cultivar-group), Oryza sativa subsp. japonica
- Bioproject
- PRJNA953663
- Biosample
- SAMN36344332
- Accession No.
- GCA_034140825.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
- Released Date
- 2025-06-03
- NCBI Released Date
- 2023-12-06
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_034140825.1 | - | - | AGIS1.0 | Draft genome in contig level | 2023-12-06 | DNA |
| GCA_034140825.1 | GCF_034140825.1 | different | AGIS1.0 | Draft genome in contig level | 2023-12-06 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 385,710,679 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 12 |
| GC content | 43.5 |
| Scaffold sequence No. | 12 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 31,111,469 |
| Scaffold N75 (bp) | 28,605,474 |
| Scaffold N90 (bp) | 27,474,823 |
| Unique components No. | 12 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |