| Scientific Name | Oryza sativa Japonica Group | ||||
| Common Name | Japonica rice; Japanese rice; Oryza sativa (japonica cultivar-group), Oryza sativa subsp. japonica | ||||
| Taxonomy ID | 39947 | ||||
| Lineage | cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa | ||||
| External Links | |||||
Assemblies (22)
| Assembly name | Accession No. | Reannotation Accession No. | Genome reperesentation | Genome size | Assembly level | Quality control | Release date | Download | Download RefSeq | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DNA | GFF | RNA | Protein | DNA | GFF | RNA | Protein | ||||||||
| AGIS-1.0 | GWHDRIN00000000 | - | Full Genome | 385,710,688 bp | Complete genome | false | 2023-08-08 | FTP | FTP | FTP | FTP | / | / | / | / |
| IRAT109 | GWHEQCB00000000 | - | Full Genome | 384,674,880 bp | Chromosome | false | 2023-10-23 | FTP | / | / | / | / | / | / | / |
| OrySat_Sep2003 | GCA_000149285.1 | - | Full Genome | 391,147,533 bp | Chromosome | true | 2023-10-25 | FTP | FTP | FTP | FTP | / | / | / | / |
| HEG4v1.0 | GCA_000817615.1 | - | Full Genome | 342,028,015 bp | Chromosome | true | 2025-02-23 | FTP | / | / | / | / | / | / | / |
| A123v1.0 | GCA_000817635.1 | - | Full Genome | 337,739,616 bp | Chromosome | true | 2023-11-07 | FTP | / | / | / | / | / | / | / |
| OrySat_Aug2009 | GCA_000164945.1 | - | Full Genome | 382,150,945 bp | Chromosome | true | 2023-11-07 | FTP | / | / | / | / | / | / | / |
| Build 4.0 | GCA_000005425.2 | GCF_000005425.2 | Full Genome | 382,150,945 bp | Chromosome | true | 2025-01-11 | FTP | FTP | FTP | FTP | FTP | FTP | FTP | FTP |
| Osat_hitom_01 | GCA_000321445.1 | - | Full Genome | 382,626,607 bp | Chromosome | true | 2025-02-23 | FTP | / | / | / | / | / | / | / |
| IRGSP-1.0 | GCA_001433935.1 | GCF_001433935.1 | Full Genome | 373,795,655 bp | Chromosome | true | 2025-01-12 | FTP | FTP | FTP | FTP | FTP | FTP | FTP | FTP |
| SJ18_v1 | GCA_002573525.1 | - | Full Genome | 418,900,741 bp | Contig | true | 2023-11-20 | FTP | / | / | / | / | / | / | / |
| ASM344906v1 | GCA_003449065.1 | - | Full Genome | 378,097,445 bp | Contig | true | 2025-02-23 | FTP | / | / | / | / | / | / | / |
| ASM386523v1 | GCA_003865235.1 | - | Full Genome | 379,625,823 bp | Chromosome | true | 2023-11-15 | FTP | / | / | / | / | / | / | / |
| ASM429570v1 | GCA_004295705.1 | - | Full Genome ( Nuclear ) | 43,342,410 bp | Chromosome | true | 2025-02-23 | FTP | FTP | FTP | FTP | / | / | / | / |
| AzucenaRS1 | GCA_009830595.1 | - | Full Genome | 381,570,127 bp | Chromosome | true | 2025-02-23 | FTP | / | / | / | / | / | / | / |
| Osativa_Kitaake_v2.0 | GCA_009797565.1 | - | Full Genome | 381,570,803 bp | Chromosome | true | 2023-11-16 | FTP | FTP | FTP | FTP | / | / | / | / |
| IGDBCAS_Zhonghua11_1.0 | GCA_014526345.1 | - | Full Genome | 378,861,062 bp | Chromosome | true | 2025-02-23 | FTP | / | / | / | / | / | / | / |
| KIT_r1.0.pmol | GCA_022834795.1 | - | Full Genome | 375,082,798 bp | Scaffold | true | 2025-02-23 | FTP | / | / | / | / | / | / | / |
| ASM2616768v1 | GCA_026167685.1 | - | Full Genome | 378,776,665 bp | Chromosome | true | 2025-02-23 | FTP | / | / | / | / | / | / | / |
| AGIS1.0 | GCA_034140825.1 | - | Full Genome | 385,710,679 bp | Complete genome | true | 2025-06-03 | FTP | / | / | / | / | / | / | / |
| Longgeng57_v1.0 | GCA_034317485.1 | - | Full Genome | 392,277,955 bp | Contig | true | 2025-06-03 | FTP | / | / | / | / | / | / | / |
| AGIS1.0 | GCA_034140825.1 | GCF_034140825.1 | Full Genome | 385,710,679 bp | Complete genome | true | 2025-05-24 | FTP | / | / | / | FTP | FTP | FTP | FTP |
| UQ_Nip_Collapsed_v1 | GCA_051403585.1 | - | Full Genome | 381,317,026 bp | Chromosome | true | 2025-07-22 | FTP | / | / | / | / | / | / | / |
Description: