- Scientific Name
- Malus domestica
- Common Names
- apple tree, cultivated apple; apple; Malus communis, Malus pumila auct., Malus pumila var. domestica, Malus sylvestris var. domestica, Malus x domestica, Pyrus malus, Pyrus malus var. domestica
- Bioproject
- PRJNA994290
- Biosample
- SAMN41652139
- Accession No.
- GCA_042453785.1
- RefSeq Accession No.
- GCF_042453785.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
- Released Date
- 2025-05-01
- NCBI Released Date
- 2024-09-27
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_042453785.1 | GCF_042453785.1 | different | GDT2T_hap1 | Draft genome in contig level | 2024-09-27 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 650,775,246 |
| Chromosomes, organellas and plasmids sequnece No. | 17 |
| Genome sequence No. | 17 |
| GC content | 38 |
| Scaffold sequence No. | 17 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 37,717,778 |
| Scaffold N75 (bp) | 34,656,096 |
| Scaffold N90 (bp) | 31,738,030 |
| Unique components No. | 17 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 651,332,481 |
| Chromosomes, organellas and plasmids sequnece No. | 19 |
| Genome sequence No. | 19 |
| GC content | 38 |
| Scaffold sequence No. | 19 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 37,717,778 |
| Scaffold N75 (bp) | 34,656,096 |
| Scaffold N90 (bp) | 31,738,030 |
| Unique components No. | 19 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |