- Scientific Name
- Misgurnus anguillicaudatus
- Common Names
- dojo loach, golden dojo loach, Japanese weatherfish, oriental weatherloach, weather loach; oriental weatherfish; Cobitis anguillicaudata
- Bioproject
- PRJNA812369
- Biosample
- SAMN26377316
- Accession No.
- GCA_027580225.2
- RefSeq Accession No.
- GCF_027580225.2
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Huazhong Agriculture University
- Released Date
- 2025-05-09
- NCBI Released Date
- 2024-11-13
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_027580225.2 | GCF_027580225.2 | - | ASM2758022v2 | Draft genome in scaffold level | 2024-11-13 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
| GCA_027580225.1 | GCF_027580225.1 | different | HAU_Mang_1.0 | Draft genome in scaffold level | 2023-01-09 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,120,296,596 |
| Chromosomes, organellas and plasmids sequnece No. | 25 |
| Genome sequence No. | 60 |
| GC content | 38 |
| Scaffold sequence No. | 60 |
| Scaffold L50 | 12 |
| Scaffold N50 (bp) | 41,472,457 |
| Scaffold N75 (bp) | 37,367,940 |
| Scaffold N90 (bp) | 33,689,331 |
| Contig sequence No. | 170 |
| Contig L50 | 12 |
| Contig N50 (bp) | 41,472,457 |
| Unique components No. | 60 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 110 |
| Ns gap sequence region length (bp) | 55,000 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 1,120,313,161 |
| Chromosomes, organellas and plasmids sequnece No. | 26 |
| Genome sequence No. | 61 |
| GC content | 38 |
| Scaffold sequence No. | 61 |
| Scaffold L50 | 12 |
| Scaffold N50 (bp) | 41,472,457 |
| Scaffold N75 (bp) | 37,367,940 |
| Scaffold N90 (bp) | 33,689,331 |
| Contig sequence No. | 171 |
| Contig L50 | 12 |
| Contig N50 (bp) | 41,472,457 |
| Unique components No. | 61 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 110 |
| Ns gap sequence region length (bp) | 55,000 |
| Gaps No. between scaffolds | 0 |