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  • Misgurnus anguillicaudatus
  • HAU_Mang_1.0
    • Scientific Name
    Misgurnus anguillicaudatus
    Common Names
    dojo loach, golden dojo loach, Japanese weatherfish, oriental weatherloach, weather loach; oriental weatherfish; Cobitis anguillicaudata
    Bioproject
    PRJNA812369
    Biosample
    SAMN26377316
    Accession No.
    GCA_027580225.1
    RefSeq Accession No.
    GCF_027580225.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Huazhong Agriculture University
    Released Date
    2023-12-10
    NCBI Released Date
    2023-01-09
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_027580225.2 GCF_027580225.2 - ASM2758022v2 Draft genome in scaffold level 2024-11-13 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_027580225.1 GCF_027580225.1 different HAU_Mang_1.0 Draft genome in scaffold level 2023-01-09 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 1,104,569,478
    Chromosomes, organellas and plasmids sequnece No. 25
    Genome sequence No. 357
    GC content 38
    Scaffold sequence No. 357
    Scaffold L50 11
    Scaffold N50 (bp) 42,952,821
    Scaffold N75 (bp) 38,972,984
    Scaffold N90 (bp) 34,590,306
    Contig sequence No. 970
    Contig L50 87
    Contig N50 (bp) 3,833,009
    Unique components No. 357
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 613
    Ns gap sequence region length (bp) 61,300
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 1,104,586,043
    Chromosomes, organellas and plasmids sequnece No. 26
    Genome sequence No. 358
    GC content 38
    Scaffold sequence No. 358
    Scaffold L50 11
    Scaffold N50 (bp) 42,952,821
    Scaffold N75 (bp) 38,972,984
    Scaffold N90 (bp) 34,590,306
    Contig sequence No. 971
    Contig L50 87
    Contig N50 (bp) 3,833,009
    Unique components No. 358
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 613
    Ns gap sequence region length (bp) 61,300
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 27957 4962 19877327 866 361 43460