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  • Larimichthys crocea
  • L_crocea_1.0
    • Scientific Name
    Larimichthys crocea
    Common Names
    croceine croaker; large yellow croaker; Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea
    Bioproject
    PRJNA245366
    Biosample
    SAMN03092871
    Accession No.
    GCA_000972845.1
    RefSeq Accession No.
    GCF_000972845.1
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    BGI
    Released Date
    2025-05-21
    NCBI Released Date
    2015-04-21
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_000972845.2 GCF_000972845.2 different L_crocea_2.0 Draft genome in scaffold level 2018-11-27 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_000972845.1 GCF_000972845.1 different L_crocea_1.0 Draft genome in chromosome level 2015-04-21 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 678,921,668
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 6,013
    GC content 41.5
    Scaffold sequence No. 6,013
    Scaffold L50 200
    Scaffold N50 (bp) 1,034,540
    Scaffold N75 (bp) 540,788
    Scaffold N90 (bp) 285,329
    Contig sequence No. 25,555
    Contig L50 2,735
    Contig N50 (bp) 68,287
    Unique components No. 25,555
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 19,542
    Ns gap sequence region length (bp) 17,630,028
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 25400 0 0 0 0 0 25400

    Statistics of Genome Assembly

    Genome size (bp) 678,938,134
    Chromosomes, organellas and plasmids sequnece No. 1
    Genome sequence No. 6,014
    GC content 41.5
    Scaffold sequence No. 6,014
    Scaffold L50 200
    Scaffold N50 (bp) 1,034,540
    Scaffold N75 (bp) 540,788
    Scaffold N90 (bp) 285,329
    Contig sequence No. 25,556
    Contig L50 2,735
    Contig N50 (bp) 68,287
    Unique components No. 25,556
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 19,542
    Ns gap sequence region length (bp) 17,630,028
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 24779 1162 01202 270 83 27496