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  • Larimichthys crocea
  • L_crocea_2.0
    • Scientific Name
    Larimichthys crocea
    Common Names
    croceine croaker; large yellow croaker; Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea
    Bioproject
    PRJNA245366
    Biosample
    SAMN03092871
    Accession No.
    GCA_000972845.2
    RefSeq Accession No.
    GCF_000972845.2
    RefSeq vs GenBank similarity
    different
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    BGI
    Released Date
    2023-12-12
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level Release Date Download Files
    GCA_000972845.2 GCF_000972845.2 different L_crocea_2.0 Draft genome in chromosome level 2018-11-27 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 657,939,568
    Chromosomes, organellas and plasmids sequnece No. 25
    Genome sequence No. 9,998
    Scaffold sequence No. 9,998
    Scaffold L50 9
    Scaffold N50 (bp) 27,037,660
    Scaffold N75 (bp) 21,415,293
    Scaffold N90 (bp) 6,444,570
    Contig sequence No. 16,979
    Contig L50 605
    Contig N50 (bp) 277,487
    Unique components No. 9,998
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 6,981
    Ns gap sequence region length (bp) 2,165,353
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 657,939,657
    Chromosomes, organellas and plasmids sequnece No. 25
    Genome sequence No. 9,998
    GC content 41.5
    Scaffold sequence No. 9,998
    Scaffold L50 9
    Scaffold N50 (bp) 27,037,660
    Scaffold N75 (bp) 21,415,293
    Scaffold N90 (bp) 6,444,570
    Contig sequence No. 16,979
    Contig L50 605
    Contig N50 (bp) 277,487
    Unique components No. 9,998
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 6,981
    Ns gap sequence region length (bp) 2,165,353
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 23367 1133 812101 623 63 27368