- Scientific Name
- Malus domestica
- Common Names
- apple tree, cultivated apple; apple; Malus communis, Malus pumila auct., Malus pumila var. domestica, Malus sylvestris var. domestica, Malus x domestica, Pyrus malus, Pyrus malus var. domestica
- Bioproject
- PRJNA28845
- Biosample
- SAMN02981243
- Accession No.
- GCA_000148765.2
- RefSeq Accession No.
- GCF_000148765.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- IASMA research center
- Released Date
- 2025-01-11
- NCBI Released Date
- 2012-08-16
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000148765.2 | GCF_000148765.1 | different | MalDomGD1.0 | Draft genome in scaffold level | 2012-08-16 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,874,368,306 |
| Chromosomes, organellas and plasmids sequnece No. | 17 |
| Genome sequence No. | 1,250 |
| GC content | 38 |
| Scaffold sequence No. | 1,666 |
| Scaffold L50 | 278 |
| Scaffold N50 (bp) | 1,893,947 |
| Scaffold N75 (bp) | 1,008,263 |
| Scaffold N90 (bp) | 558,406 |
| Contig sequence No. | 106,203 |
| Contig L50 | 14,520 |
| Contig N50 (bp) | 12,403 |
| Unique components No. | 104,721 |
| No. of regions with alternate loci or patches | 436 |
| Ns gap sequence No. (bp) | 104,537 |
| Ns gap sequence region length (bp) | 1,176,877,785 |
| Gaps No. between scaffolds | 416 |