- Scientific Name
- Oryza sativa Japonica Group
- Common Names
- Japonica rice; Japanese rice; Oryza sativa (japonica cultivar-group), Oryza sativa subsp. japonica
- Bioproject
- PRJNA396093
- Biosample
- SAMN07420929
- Accession No.
- GCA_002573525.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- RFGB database
- Released Date
- 2023-11-20
- NCBI Released Date
- 2017-10-17
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002573525.1 | - | - | SJ18_v1 | Complete genome | 2017-10-17 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 418,900,741 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 588 |
| Contig sequence No. | 588 |
| Contig L50 | 52 |
| Contig N50 (bp) | 2,522,746 |
| Unique components No. | 588 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |