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  • Arabidopsis thaliana
  • TAIR10.1
    • Scientific Name
    Arabidopsis thaliana
    Common Names
    mouse-ear cress, thale-cress; thale cress; Arabis thaliana
    Bioproject
    PRJNA10719
    Biosample
    SAMN03081427
    Accession No.
    GCA_000001735.2
    RefSeq Accession No.
    GCF_000001735.4
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    The Arabidopsis Information Resource (TAIR)
    Released Date
    2024-06-09
    NCBI Released Date
    2018-03-15
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_000001735.2 GCF_000001735.4 identical TAIR10.1 Draft genome in scaffold level 2018-03-15 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    GCA_000001735.1 GCF_000001735.3 different TAIR10 Draft genome in scaffold level 2011-05-11 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 119,668,634
    Chromosomes, organellas and plasmids sequnece No. 7
    Genome sequence No. 7
    GC content 36
    Scaffold sequence No. 7
    Scaffold L50 3
    Scaffold N50 (bp) 23,459,830
    Scaffold N75 (bp) 19,698,289
    Scaffold N90 (bp) 18,585,056
    Contig sequence No. 102
    Contig L50 5
    Contig N50 (bp) 11,194,537
    Unique components No. 7
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 95
    Ns gap sequence region length (bp) 185,644
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 27563 672 12 4982 4850 16 38095

    Statistics of Genome Assembly

    Genome size (bp) 119,668,634
    Chromosomes, organellas and plasmids sequnece No. 7
    Genome sequence No. 7
    GC content 36
    Scaffold sequence No. 7
    Scaffold L50 3
    Scaffold N50 (bp) 23,459,830
    Scaffold N75 (bp) 19,698,289
    Scaffold N90 (bp) 18,585,056
    Contig sequence No. 102
    Contig L50 5
    Contig N50 (bp) 11,194,537
    Unique components No. 7
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 95
    Ns gap sequence region length (bp) 185,644
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 27562 672 115201 4851 15 38312