- Scientific Name
- Malus domestica
- Common Names
- apple tree, cultivated apple; apple; Malus communis, Malus pumila auct., Malus pumila var. domestica, Malus sylvestris var. domestica, Malus x domestica, Pyrus malus, Pyrus malus var. domestica
- Bioproject
- PRJNA482033
- Biosample
- SAMN09744170
- Accession No.
- GCA_004115385.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- nextomics
- Released Date
- 2025-02-23
- NCBI Released Date
- 2019-01-29
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 660,462,720 |
| Chromosomes, organellas and plasmids sequnece No. | 17 |
| Genome sequence No. | 343 |
| GC content | 38 |
| Scaffold sequence No. | 343 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 37,138,690 |
| Scaffold N75 (bp) | 32,944,118 |
| Scaffold N90 (bp) | 31,511,015 |
| Contig sequence No. | 502 |
| Contig L50 | 32 |
| Contig N50 (bp) | 6,988,123 |
| Unique components No. | 343 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 159 |
| Ns gap sequence region length (bp) | 1,563,414 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 42841 | 0 | 0 | 0 | 0 | 0 | 42841 |