- Scientific Name
- Camellia sinensis var. sinensis
- Common Names
- -
- Bioproject
- PRJNA510226
- Biosample
- SAMN06329939
- Accession No.
- GCA_004153795.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Anhui Agricultural University
- Released Date
- 2024-10-01
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_004153795.1 | GCF_004153795.1 | different | AHAU_CSS_1 | Draft genome in chromosome level | 2019-02-11 | DNA GFF RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
| GCA_004153795.2 | - | - | AHAU_CSS_2 | Draft genome in chromosome level | 2019-04-21 | DNA GFF RNA Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,863,254,423 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 13,892 |
| GC content | 38 |
| Scaffold sequence No. | 13,892 |
| Scaffold L50 | 669 |
| Scaffold N50 (bp) | 1,320,966 |
| Scaffold N75 (bp) | 708,030 |
| Scaffold N90 (bp) | 334,934 |
| Contig sequence No. | 87,535 |
| Contig L50 | 11,601 |
| Contig N50 (bp) | 66,344 |
| Unique components No. | 13,892 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 73,643 |
| Ns gap sequence region length (bp) | 228,193,957 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 30173 | 0 | 0 | 0 | 0 | 0 | 30173 |