- Scientific Name
- Malus domestica
- Common Names
- apple tree, cultivated apple; apple; Malus communis, Malus pumila auct., Malus pumila var. domestica, Malus sylvestris var. domestica, Malus x domestica, Pyrus malus, Pyrus malus var. domestica
- Bioproject
- PRJNA666203
- Biosample
- SAMN16283546
- Accession No.
- GCA_022606005.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- The New Zealand Institute for Plant & Food Research Ltd
- Released Date
- 2023-11-16
- NCBI Released Date
- 2022-03-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_022606005.1 | - | - | PFR_Mdom_1.0 | Draft genome in scaffold level | 2022-03-17 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 754,684,250 |
| Chromosomes, organellas and plasmids sequnece No. | 17 |
| Genome sequence No. | 8,974 |
| GC content | 38 |
| Scaffold sequence No. | 8,974 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 35,935,999 |
| Scaffold N75 (bp) | 30,927,727 |
| Scaffold N90 (bp) | 18,576 |
| Contig sequence No. | 15,318 |
| Contig L50 | 1,749 |
| Contig N50 (bp) | 107,900 |
| Unique components No. | 8,974 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 6,344 |
| Ns gap sequence region length (bp) | 697,426 |
| Gaps No. between scaffolds | 0 |