- Scientific Name
- Malus domestica
- Common Names
- apple tree, cultivated apple; apple; Malus communis, Malus pumila auct., Malus pumila var. domestica, Malus sylvestris var. domestica, Malus x domestica, Pyrus malus, Pyrus malus var. domestica
- Bioproject
- PRJNA599187
- Biosample
- SAMN13385708
- Accession No.
- GCA_028456065.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Cornell University
- Released Date
- 2024-03-09
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_028456065.1 | - | - | Malus_domestica_Gala.altB | Draft genome in chromosome level | 2023-02-06 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 577,209,808 |
| Chromosomes, organellas and plasmids sequnece No. | 17 |
| Genome sequence No. | 17 |
| GC content | 38 |
| Scaffold sequence No. | 17 |
| Scaffold L50 | 7 |
| Scaffold N50 (bp) | 36,439,285 |
| Scaffold N75 (bp) | 30,188,683 |
| Scaffold N90 (bp) | 25,301,002 |
| Contig sequence No. | 50,450 |
| Contig L50 | 815 |
| Contig N50 (bp) | 100,867 |
| Unique components No. | 17 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 50,433 |
| Ns gap sequence region length (bp) | 6,044,181 |
| Gaps No. between scaffolds | 0 |