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2019-nCoV Sequences Coronaviruses Sequences Genome Data Submission FTP Download Raw Data
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Home
Genome Sequences
2019-nCoV Sequences Coronaviruses Sequences Genome Data Submission FTP Download Raw Data
Monitoring
Genome Variations
Lineage Browse Visualization Data Statistics Variation Annotation Spatiotemporal Dynamics Phylogentic Tree Viral Haplotype Network
Clinical Records
Online Tools
Genome Tracing Genome Assembly Variation Identification Variation Annotation Genome Annotation BLAST SeqQC Haplotype Phylogenetic Tree Pango Lineage Assigner & Phylogenetic Placement AI Diagnosis
Literature
About
RCoV19 How to cite Data Sources Contact Us
Language / 语言
English 简体中文

Pangolin COVID-19 Lineage Assigner         Demo

Functions

The Pango Lineage Assigner supports Pango lineage assigned for submitted SARS-CoV-2 genome sequences based on the software Pangolin.
Current Versions are Pangolin version: , Pangolin-data:

Fasta Sequence    Fasta Example
Or load it from disk
Parameter Selection
analysis-mode
max-ambig
min-length
Email (Results will be notified via email when the calculating time is long)
Email
 
Subject
Run
Reminder: Running tasks: , Tasks in queue: .