Identification and characterization of three novel HLA alleles, HLA-A*240214, HLA-A*3215 and HLA-DQB1*060302.

A Heinold, M Bauer, G Opelz, S Scherer, A H Schmidt, T H Tran
Author Information
  1. A Heinold: Department of Transplantation Immunology, Institute of Immunology, University of Heidelberg, Heidelberg, Germany.

Abstract

We describe three novel human leukocyte antigen (HLA) alleles found in three different Caucasians, HLA-A*240214, HLA-A*3215 and HLA-DQB1*060302. As compared with HLA-A*24020101, HLA-A*240214 has a synonymous nucleotide (nt) exchange in codon 132. HLA-A*240214 may have arisen from intergenic recombination between HLA-A*24020101 and an HLA-B or HLA-C allele. The second novel allele, HLA-A*3215, has three nucleotide exchanges as compared with HLA-A*320101. These variations result in amino acid exchanges in codons 62 and 63, generating the public epitope of the serological HLA-A10 group. The third novel allele, HLA-DQB1*060302, has one synonymous nucleotide exchange within codon 38 as compared with HLA-DQB1*060301. In a family segregation study, we found that HLA-DQB1*060302, similar to the known HLA-DQB1*060301 allele, cosegregates with HLA-DRB1*1301.

Associated Data

GENBANK | AM293569; AM422702; AM497719

MeSH Term

Alleles
Amino Acid Sequence
Amino Acid Substitution
Base Sequence
Genetic Variation
HLA Antigens
HLA-A Antigens
HLA-A24 Antigen
HLA-DQ Antigens
HLA-DQ beta-Chains
Humans
Molecular Sequence Data
Sequence Alignment
White People

Chemicals

HLA Antigens
HLA-A Antigens
HLA-A*24:02:14 antigen
HLA-A*32:15 antigen
HLA-A24 Antigen
HLA-DQ Antigens
HLA-DQ beta-Chains
HLA-DQB1 antigen

Word Cloud

Created with Highcharts 10.0.0threenovelHLA-A*240214HLA-DQB1*060302alleleHLA-A*3215comparednucleotideHLAallelesfoundHLA-A*24020101synonymousexchangecodonexchangesHLA-DQB1*060301describehumanleukocyteantigendifferentCaucasiansnt132mayarisenintergenicrecombinationHLA-BHLA-CsecondHLA-A*320101variationsresultaminoacidcodons6263generatingpublicepitopeserologicalHLA-A10groupthirdonewithin38familysegregationstudysimilarknowncosegregatesHLA-DRB1*1301Identificationcharacterization

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