POCO1 - Plant Editosome Database

Editing Details

Species

Gene ID

Organelle

Edited Gene

Position

Region

Nuclear Genome

Organelle Genome

Other Position Region

Other Position

Editing Type

Codon

Amino Acid

Molecular Effect

Experiment Details

Arabidopsis thaliana

AT1G15480

Mitochondrion

ccmFc

146

CDS

TAIR

NC_037304

C-to-U

CCU=>CUU

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	17.60%	Poor	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	79.10%	High	Increased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

ccmFc

160

CDS

TAIR

NC_037304

C-to-U

CCU=>UCU

P=>S

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	0.00%	Unedited	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	63.10%	High	Increased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

ccmFc

415

CDS

TAIR

NC_037304

C-to-U

CUC=>UUC

L=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	0.00%	Unedited	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	33.30%	Low	Increased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

cox3

687

CDS

TAIR

NC_037304

C-to-U

CCA=>UCA

P=>S

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	84.60%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	44.40%	Medium	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

matR

1683

CDS

TAIR

NC_037304

C-to-U

NA=>NA

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	71.40%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	0.00%	Unedited	Absent	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

mttB

682

CDS

TAIR

NC_037304

C-to-U

CGU=>UGU

R=>C

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	100.00%	Complete	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	25.00%	Low	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

nad1

823

CDS

TAIR

NC_037304

C-to-U

CUU=>UUU

L=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	50.00%	Medium	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	87.50%	High	Increased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

nad2

1403

CDS

TAIR

NC_037304

C-to-U

UCC=>UUC

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	100.00%	Complete	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	42.80%	Medium	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

nad4

1194

CDS

TAIR

NC_037304

C-to-U

NA=>NA

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	0.00%	Unedited	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	54.50%	Medium	Increased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

nad5

1958

CDS

TAIR

NC_037304

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	100.00%	Complete	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	0.00%	Unedited	Absent	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

nad7

1124

CDS

TAIR

NC_037304

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	36.30%	Low	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	67.70%	High	Increased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

nad7

CDS

TAIR

NC_037304

C-to-U

NA=>NA

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	83.30%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	25.00%	Low	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

nad7

CDS

TAIR

NC_037304

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	70.00%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	25.00%	Low	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

nad7

963

CDS

TAIR

NC_037304

C-to-U

NA=>NA

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	64.70%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	35.80%	Low	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps3

1344

CDS

TAIR

NC_037304

C-to-U

NA=>NA

Synonymous

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RT‐PCR	41.10%	Medium	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RT‐PCR	10.00%	Poor	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps3

CDS

TAIR

NC_037304

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	61.10%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	30.00%	Low	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps4

1042

CDS

TAIR

NC_037304

C-to-U

CCA=>UUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	62.50%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	0.00%	Unedited	Absent	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps4

1043

CDS

TAIR

NC_037304

C-to-U

CCA=>UUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	62.50%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	0.00%	Unedited	Absent	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps4

1052

CDS

TAIR

NC_037304

C-to-U

CCU=>CUU

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	62.50%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	0.00%	Unedited	Absent	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps4

1057

CDS

TAIR

NC_037304

C-to-U

CGG=>UGG

R=>W

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	62.50%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	0.00%	Unedited	Absent	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps4

308

CDS

TAIR

NC_037304

C-to-U

CCA=>CUA

P=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	83.30%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	40.00%	Medium	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps4

956

CDS

TAIR

NC_037304

C-to-U

UCG=>UUG

S=>L

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	72.70%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	25.00%	Low	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps4

967

CDS

TAIR

NC_037304

C-to-U

CAU=>UAU

H=>Y

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	72.70%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	25.00%	Low	Decreased	31219634

Arabidopsis thaliana

AT1G15480

Mitochondrion

rps4

992

CDS

TAIR

NC_037304

C-to-U

UCU=>UUU

S=>F

Recoding

**Experiment Details**
Genotype (Ecotype)	Allele	Treatment	Treatment Detail	Mutant Type	Phenotype	Tissue	Development Stage	Detection Method	Editing Frequency	Editing Extent	Mutant Effect	PMID
WS‐4	wt	Wild Type	Wild Type	No mutant	Normal	Leaf	NA	RNA-Seq	66.60%	High	None	31219634
FLAG_465F03	poco1	A T‐DNA insertion	A 40 nucleotide cox2 fragment containing the +476 and 31 nucleotide downstream and eight nucleotide upstream of this editing site. The TDat1g15480 plants (FLAG_465F03) were obtained from the INRA Arab	Homozygous	During growth and development, the homozygous T‐DNA insertion line displayed an early‐flowering phenotype compared with the corresponding wild type (Wassilewskija 4 = Ws‐4) plants. poco1 plants show an altered sensitivity to ABA and drought stress.	Leaf	NA	RNA-Seq	28.50%	Low	Decreased	31219634

Editing Factor:	POCO1
Synonym:	PRECOCIOUS1
Description:	poco1 plants showed lower respiration, ATP content and higher accumulation of superoxide; Importantly, the quantitative reverse transcription polymerase chain reaction (qRT-PCR) analysis showed that the expression of FLOWERING LOCUS C (FLC), which is a key floral repressor, was strongly downregulated in the poco1; Likewise, the expression level of the FLC positive regulator ABSCISIC ACID-INSENSITIVE 5 (ABI5) was reduced in the poco1; Consistent with the qRT-PCR results, poco1 plants showed reduced sensitivity to abscisic acid compared with wild type with respect to primary root growth and days to flowering
Protein Family:	PPR
Subclass:	P
Physical Interaction:	NA
Construct Structure:	P
Gene ID & Species:	AT1G15480 (Arabidopsis thaliana)
Edited Gene(s):	ccmFc cox3 matR mttB nad1 nad2 nad4 nad5 nad7 rps3 rps4
Editing Type(s):	C-to-U (48)
Publication(s):	[1] PRECOCIOUS1 (POCO1), a mitochondrial pentatricopeptide repeat protein affects flowering time in Arabidopsis thaliana., The Plant journal : for cell and molecular biology, 2019. [PMID=31219634]

Summary

Editing Details