Plant
Editosome
Database
Summary
| Gene: | rps3 |
| Function: | Ribosomal protein |
| Species: | 66 |
| Editing Factors: | 33 (bCCP1, BLX, DEK53, DEK55, DEK56, DG409, DYW2, DYW2A, DYW2B, EMP21, EMP7, GRP23, Lon1, MEF37, MEF8, MORF1, MORF3, MORF8, NUWA, ORRM2, ORRM3, ORRM4, ORRM5, OTP90, PAP2, PCW1, PGN, POCO1, PPR27, PPR596, REME2, RID4, SOP10) |
| Editing Types: |
|
| Editing Sites: | 486 (C-to-U: 375 NA: 73 U-to-C: 38) |
| External Link: | NCBI Gene |
| Species | Organelle | Editing Sites | Editing Types | Genomic Position | Region | Strand | Type | Codons | Amino Acid |
|---|---|---|---|---|---|---|---|---|---|
| Adiantum capillus-veneris | Chloroplast | 1 | NA: 1 | 78507-79160 | CDS | - | NA | NA=>NA | NA=>NA |
| Alsophila spinulosa | Chloroplast | 1 | NA: 1 | 82547-83233 | CDS | - | NA | NA=>NA | NA=>NA |
| Ampelopteris prolifera | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 79078-79734 79689 79733 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Anthoceros angustus | Chloroplast | 7 | C-to-U: 3 NA: 1 U-to-C: 3 | 101887-102543 101903 101939 101943 101976 101987 102092 | CDS NA NA NA NA NA NA | - + + + + + + | NA C-to-U U-to-C U-to-C U-to-C C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| Arabidopsis thaliana | Mitochondrion | 15 | C-to-U: 13 NA: 2 | 25482-27077 25555 25573 25582 25619 25683 25801 25809 26266 26550 26638 26966 27027 28659-28733 28670 | CDS NA NA NA NA NA NA NA NA NA NA NA NA CDS NA | - + + + + + + + + + + + + - + | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U NA C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| Asclepias syriaca | Mitochondrion | 2 | NA: 2 | 502506-502579 504203-505796 | CDS CDS | + + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Asplenium pekinense | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 77717-78370 78325 78369 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Asplenium prolongatum | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 77877-78530 78485 78529 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Athyrium anisopterum | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78824-79480 79435 79479 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Athyrium opacum | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78662-79318 79273 79317 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Athyrium sheareri | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78814-79470 79425 79469 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Athyrium sinense | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78770-79426 79381 79425 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Austroblechnum melanocaulon | Chloroplast | 2 | NA: 1 U-to-C: 1 | 78900-79556 79511 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Beta macrocarpa | Mitochondrion | 5 | C-to-U: 5 | 187283 187484 187802 188135 188162 | CDS CDS CDS CDS CDS | + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA UCG=>UUG CCA=>CUA CCG=>CUG CCG=>CUG | S=>L S=>L P=>L P=>L P=>L |
| Beta vulgaris subsp. maritima | Mitochondrion | 5 | C-to-U: 5 | 187366 187567 187885 188218 188245 | CDS CDS CDS CDS CDS | + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA UCG=>UUG CCA=>CUA CCG=>CUG CCG=>CUG | S=>L S=>L P=>L P=>L P=>L |
| Beta vulgaris subsp. vulgaris | Mitochondrion | 6 | C-to-U: 6 | 271519 271720 271762 272038 272371 272398 | CDS CDS CDS CDS CDS CDS | + + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA UCG=>UUG UCC=>UUC CCA=>CUA CCG=>CUG CCG=>CUG | S=>L S=>L S=>F P=>L P=>L P=>L |
| Brassica napus | Mitochondrion | 6 | C-to-U: 6 | 198682 200932 200980 201673 201799 201863 | CDS CDS CDS CDS CDS CDS | + + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CGG=>UGG UUC=>UUU UCC=>UCU AGC=>AGU UCC=>UCU CGU=>UGU | R=>W F=>F S=>S S=>S S=>S R=>C |
| Christella appendiculata | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78907-79566 79521 79565 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Citrullus lanatus | Mitochondrion | 2 | NA: 2 | 32933-33006 34732-36349 | CDS CDS | + + | NA NA | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Cocos nucifera | Chloroplast | 2 | C-to-U: 2 | 82822 82935 | CDS CDS | - - | C-to-U C-to-U | CAU=>UAU ACA=>AUA | S=>L S=>L |
| Cucurbita pepo | Mitochondrion | 10 | C-to-U: 10 | 663462 665370 665404 665548 665793 665994 666171 666648 666786 666872 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UUC=>UUY UCA=>UUA UUC=>UUY CCC=>CCY UCA=>UUA UCG=>UUG UCG=>UYG CCG=>CUG UCA=>UUA CCC=>UCC | F=>F S=>L F=>F P=>P S=>L S=>L S=>S/L P=>L S=>L P=>S |
| Cyrtomium devexiscapulae | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78726-79382 79337 79381 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Cyrtomium falcatum | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78874-79530 79485 79529 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Cystopteris chinensis | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78961-79617 79572 79616 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Deparia lancea | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78577-79233 79188 79232 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Deparia pycnosora | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78876-79532 79487 79531 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Deparia viridifrons | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78867-79523 79478 79522 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplaziopsis cavaleriana | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 79269-79925 79880 79924 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplaziopsis javanica | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 79540-80196 80151 80195 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplazium bellum | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78801-79457 79412 79456 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplazium dilatatum | Chloroplast | 2 | C-to-U: 1 NA: 1 | 78728-79384 79339 | CDS NA | - + | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Diplazium dushanense | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78734-79390 79345 79389 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplazium striatum | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78303-78959 78914 78958 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplazium unilobum | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78741-79397 79352 79396 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Diplopterygium glaucum | Chloroplast | 1 | NA: 1 | 96244-96897 | NA | - | NA | NA=>NA | NA=>NA |
| Dryopteris decipiens | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78802-79458 79413 79457 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Elaeis guineensis | Chloroplast | 4 | C-to-U: 4 | 84087 84131 84244 84684 | CDS CDS CDS CDS | NA NA NA NA | C-to-U C-to-U C-to-U C-to-U | AUC=>AUU CAU=>UAU ACA=>AUA UUC=>UUU | I=>I H=>Y T=>I F=>F |
| Ginkgo biloba | Mitochondrion | 3 | NA: 3 | 41503-42972 43957-44149 46431-46504 | CDS CDS CDS | - - - | NA NA NA | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Homalosorus pycnocarpos | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 79518-80174 80129 80173 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Hymenasplenium unilaterale | Chloroplast | 2 | C-to-U: 1 NA: 1 | 79653-80312 80311 | CDS NA | - + | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Hypodematium crenatum | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78436-79092 79047 79091 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Lepisorus clathratus | Chloroplast | 2 | NA: 1 U-to-C: 1 | 77438-78094 78049 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Lotus japonicus | Mitochondrion | 8 | C-to-U: 8 | 53352 53416 53469 53607 53940 54258 54459 56575 | CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - - | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA CGU=>UGU UCA=>UUA CCG=>CUG CCA=>CUA UCG=>UUG UCA=>UUA CGG=>UGG | S=>L R=>C S=>L P=>L P=>L S=>L S=>L R=>W |
| Lygodium japonicum | Chloroplast | 1 | NA: 1 | 81824-82480 | CDS | - | NA | NA=>NA | NA=>NA |
| Macrothelypteris torresiana | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78715-79371 79326 79370 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Matteuccia struthiopteris | Chloroplast | 2 | C-to-U: 1 NA: 1 | 78259-78915 78914 | CDS NA | - + | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Millettia pinnata | Mitochondrion | 8 | C-to-U: 8 | 291793 293747 293948 294266 294605 294743 294796 294860 | CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CGG=>UGG UCA=>UUA UCG=>UUG CCA=>CUA CCG=>CUG UCA=>UUA CGU=>UGU UCA=>UUA | R=>W S=>L S=>L P=>L P=>L S=>L R=>C S=>L |
| Myriopteris lindheimeri | Chloroplast | 2 | NA: 1 U-to-C: 1 | 79363-80019 79974 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Nelumbo nucifera | Mitochondrion | 19 | C-to-U: 17 NA: 2 | 373469-375086 373528 373542 373573 373606 373659 373770 373797 373844 374130 374271 374448 374462 374649 375069 377299-377372 377304 377309 377315 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - + + + + + + + + + + + + + + - + + + | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U NA C-to-U C-to-U C-to-U | NA=>NA UGC=>UGU UCA=>UUA CCU=>UCU CGU=>UGU UCA=>UUA CCG=>CUG CCG=>CUG ACC=>ACU CCA=>CUA UCG=>UUG UCG=>UUG CCC=>CCU UCA=>UUA UCA=>UUA NA=>NA UUC=>UUU CGG=>UGG CCA=>UCA | NA=>NA C=>C S=>L P=>S R=>C S=>L P=>L P=>L U=>U P=>L S=>L S=>L P=>P S=>L S=>L NA=>NA F=>F R=>W P=>S |
| Nothoceros aenigmaticus | Plastid | 1 | NA: 1 | 103895-104551 | NA | - | NA | NA=>NA | NA=>NA |
| Onoclea sensibilis | Chloroplast | 2 | C-to-U: 1 NA: 1 | 77918-78574 78573 | CDS NA | - + | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Ophioglossum californicum | Mitochondrion | 29 | C-to-U: 29 | 15569 15594 15612 15615 15648 15711 15724 15776 15813 15867 15881 15912 15929 15968 16059 16109 16338 16350 16351 16353 16369 16403 16425 16583 16638 16823 16841 17777 23578 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS Intron CDS | NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UAC=>UAU UCA=>UUA UCU=>UUU ACA=>AUA UCU=>UUU UCA=>UUA CGU=>UGU UCC=>UCU UCA=>UUA GCG=>GUG AUC=>AUU UCG=>UUG CCC=>CCU UGC=>UGU CCG=>CUG UCC=>UCU UCU=>UUU UCU=>UUU CCU=>UCU ACA=>AUA CCU=>UCU UCC=>UCU ACU=>AUU UCC=>UCU GCG=>GUG UUC=>UUU CAC=>CAU NA=>NA GUC=>GUU | Y=>Y S=>L S=>F T=>I S=>F S=>L R=>C S=>S S=>L A=>V I=>I S=>L P=>P C=>C P=>L S=>S S=>F S=>F P=>S T=>I P=>S S=>S T=>I S=>S A=>V F=>F H=>H NA=>NA V=>V |
| Oryza sativa Japonica Group | Mitochondrion | 8 | C-to-U: 8 | 170893 170899 170904 172774 173184 173325 173637 174225 | CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CCA=>UCA CGG=>UGG UUC=>UUU UCA=>UUA CAC=>UAC CGG=>UGG CAA=>UAA CAG=>UAG | P=>S R=>W F=>F S=>L H=>Y R=>W Q=>TERM Q=>TERM |
| Pseudophegopteris aurita | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78354-79010 78965 79009 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Psilotum nudum | Mitochondrion | 19 | C-to-U: 17 U-to-C: 2 | 190019 191985 192026 192039 194018 194118 194172 194251 194252 194282 194551 194578 194622 194650 194668 194669 194818 194892 194922 | CDS Intron CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS 3'UTR | NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA | C-to-U C-to-U C-to-U C-to-U C-to-U U-to-C U-to-C C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CCG=>CUG NA=>NA UCU=>UUU UUC=>UUU AUC=>AUU UGA=>CGA UAG=>CAG UCC=>UUC UUC=>UUU UCC=>UCU UCG=>UUG UCG=>UUG CUA=>UUA CCA=>CUA UCC=>UUC UUC=>UUU UCU=>UUU CCA=>UCA NA=>NA | P=>L NA=>NA S=>F F=>F I=>I TERM=>R TERM=>Q S=>F F=>F S=>S S=>L S=>L L=>L P=>L S=>F F=>F S=>F P=>S NA=>NA |
| Pteridium aquilinum subsp. aquilinum | Chloroplast | 2 | NA: 1 U-to-C: 1 | 80679-81335 81290 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Ptychomnion cygnisetum | Mitochondrion | 1 | C-to-U: 1 | 94517 | CDS | + | C-to-U | CAA=>UAA | Q=>TERM |
| Rhachidosorus consimilis | Chloroplast | 2 | C-to-U: 1 NA: 1 | 79605-80261 80260 | CDS NA | - + | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Schizaea elegans | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 71980-72636 72606 72635 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Schizaea pectinata | Chloroplast | 2 | NA: 1 U-to-C: 1 | 69748-70404 70374 | CDS NA | - + | NA U-to-C | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Stegnogramma sagittifolia | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78508-79164 79119 79163 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Welwitschia mirabilis | Mitochondrion | 1 | NA: 1 | 106267-108639 | CDS | - | NA | NA=>NA | NA=>NA |
| Woodsia macrochlaena | Chloroplast | 2 | C-to-U: 1 NA: 1 | 78754-79410 79409 | CDS NA | - + | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Woodsia polystichoides | Chloroplast | 2 | C-to-U: 1 NA: 1 | 78470-79126 79125 | CDS NA | - + | NA C-to-U | NA=>NA NA=>NA | NA=>NA NA=>NA |
| Woodwardia unigemmata | Chloroplast | 3 | C-to-U: 1 NA: 1 U-to-C: 1 | 78729-79385 79340 79384 | CDS NA NA | - + + | NA U-to-C C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| Species | Organelle | Editing Sites | Editing Types | Genomic Position | Region | Strand | Type | Codons | Amino Acid |
( NA = Data Not Available )
Last update: Sep 2026
(version 2.0)