matR - Plant Editosome Database - BIG Data Center

Summary

Gene: matR
Function: Intron maturase
Species: 19
Editing Factors:15 (DYW2, EMP21, EMP7, MEF11, MEF14, MEF37, MEF8, MORF1, MORF8, NUWA, ORRM4, OTP90, PGN, REME1, SlORRM4)
Editing Types:
C-to-U (188)
Editing Events: 203 (C-to-U: 188   NA: 15)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Arabidopsis thalianaMitochondrion20
C-to-U: 18
NA: 2
144294-146312
144418
144506
144542
144562
144583
145939
146029
146072
146233
NA
CDS
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
CDS
NA
NA
NA
NA
+
-
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Asclepias syriacaMitochondrion2
NA: 2
556687-558594CDS
CDS
-NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Brassica carinataMitochondrion1
NA: 1
200473-202506CDS+NANA=>NANA=>NA
Brassica junceaMitochondrion1
NA: 1
196676-198709CDS+NANA=>NANA=>NA
Brassica napusMitochondrion16
C-to-U: 16
60162
60249
61521
61542
61562
61598
61668
61686
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CAC=>UAC
CAC=>UAC
CGC=>UGC
CGC=>UGC
UCA=>UUA
UCA=>UUA
UCC=>UUC
UCC=>UUC
CCU=>CUU
CCU=>CUU
UCG=>UUG
UCG=>UUG
CCC=>CUC
CCC=>CUC
CCA=>CUA
CCA=>CUA
H=>Y
H=>Y
R=>C
R=>C
S=>L
S=>L
S=>F
S=>F
P=>L
P=>L
S=>L
S=>L
P=>L
P=>L
P=>L
P=>L
Brassica oleracea var. oleraceaMitochondrion1
NA: 1
4661-6694CDS-NANA=>NANA=>NA
Brassica rapa subsp. oleiferaMitochondrion1
NA: 1
196656-198689CDS+NANA=>NANA=>NA
Citrullus lanatusMitochondrion4
C-to-U: 4
187266
187321
187936
188587
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
UAC=>UAU
CCU=>CYU
UCG=>UYG
UCC=>UYC
Y=>Y
P=>P/L
S=>S/L
S=>S/F
Cucurbita pepoMitochondrion4
C-to-U: 4
630492
630584
630639
631254
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
UCC=>UUC
UAC=>UAU
CCA=>CUA
CCU=>CUU
S=>F
Y=>Y
P=>L
P=>L
Cycas taitungensisMitochondrion2
C-to-U: 2
362747CDS
CDS
-C-to-U
C-to-U
CAG=>UAG
CAG=>UAG
Q=>TERM
Q=>TERM
Ginkgo bilobaMitochondrion1
NA: 1
101109-103238CDS-NANA=>NANA=>NA
Lotus japonicusMitochondrion20
C-to-U: 20
43787
43948
44081
44819
45434
45455
45489
45511
45581
45599
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UAC=>UAU
UCC=>UUC
UCA=>UUA
CCC=>CUC
UCU=>UUU
CAC=>UAC
UAC=>UAU
UCU=>UUU
CCC=>CUC
CCC=>CUC
CAC=>UAC
CCA=>UCA
CCU=>CUU
CCA=>CUA
CCC=>CUC
CCU=>CUU
UCC=>UUC
CCA=>UCA
CCA=>CUA
UCA=>UUA
Y=>Y
S=>F
S=>L
P=>L
S=>F
H=>Y
Y=>Y
S=>F
P=>L
P=>L
H=>Y
P=>S
P=>L
P=>L
P=>L
P=>L
S=>F
P=>S
P=>L
S=>L
Millettia pinnataMitochondrion22
C-to-U: 22
371198
371359
371492
372224
372830
372851
372871
372885
372907
372977
372995
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>CUC
CAC=>UAC
CCC=>CUC
CAC=>UAC
CCC=>CUC
UAC=>UAU
UAC=>UAU
CCU=>CUU
CCU=>CUU
CCA=>UCA
UCA=>UUA
CCA=>UCA
UCA=>UUA
CCA=>CUA
CCA=>CUA
UCU=>UUU
CGC=>UGC
UCU=>UUU
CGC=>UGC
UCC=>UUC
UCC=>UUC
CCC=>CUC
P=>L
H=>Y
P=>L
H=>Y
P=>L
Y=>Y
Y=>Y
P=>L
P=>L
P=>S
S=>L
P=>S
S=>L
P=>L
P=>L
S=>F
R=>C
S=>F
R=>C
S=>F
S=>F
P=>L
Nelumbo nuciferaMitochondrion19
C-to-U: 19
70629
70635
70646
70796
70838
70839
70929
71016
71526
71667
72282
72303
72323
72337
72359
72390
72429
72437
72447
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCG=>UUG
CCC=>CUC
UCC=>UUC
CCA=>CUA
UAC=>UAU
CCA=>CUA
CCA=>UCA
UCA=>UUA
CGC=>UGC
CCC=>UCC
CCC=>CUC
CCC=>UCC
CAC=>UAC
UCC=>UUC
UCA=>UUA
CCU=>CUU
CCA=>CUA
CCC=>CUC
CCC=>UCC
S=>L
P=>L
S=>F
P=>L
Y=>Y
P=>L
P=>S
S=>L
R=>C
P=>S
P=>L
P=>S
H=>Y
S=>F
S=>L
P=>L
P=>L
P=>L
P=>S
Ophioglossum californicumMitochondrion2
C-to-U: 2
147200CDS
CDS
NAC-to-U
C-to-U
CCA=>CUA
CCA=>CUA
P=>L
P=>L
Psilotum nudumMitochondrion1
C-to-U: 1
30238CDSNAC-to-UUCG=>UUGS=>L
Sinapis arvensisMitochondrion1
NA: 1
195477-197510CDS+NANA=>NANA=>NA
Welwitschia mirabilisMitochondrion1
NA: 1
837974-840559CDS+NANA=>NANA=>TERM
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)