Species: | Phoenix dactylifera |
NCBI Taxonomy: | 42345 |
Organelle: | Mitochondrion (NC_016740.1) |
Edited Genes: | 7 |
Editing Events: | 56 |
Gene | Editing Events | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
---|---|---|---|---|---|---|---|---|
atp1 | 13 | 293685 293676 293617 293601 293478 293448 293364 293354 293250 293225 293157 292856 292432 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCU=>UUU CCA=>CUA CCC=>CCU CCA=>CUA CCC=>CUC CCC=>CUC UCA=>UUA CGC=>UGC UCG=>UUG CCC=>UCC UCG=>UUG CCA=>UCA ACC=>ACU | S=>F P=>L P=>P P=>L P=>L P=>L S=>L R=>C S=>L P=>S S=>L P=>S T=>T |
atp4 | 10 | 248700 248721 248868 248889 248901 248998 249027 249045 249057 249060 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | ACU=>AUU UCA=>UUA CCU=>CUU UCC=>UUC UCG=>UUG CGU=>UGU UCA=>UUA UCA=>UUA UCU=>UUU CCA=>CUA | T=>I S=>L P=>L S=>F S=>L R=>C S=>L S=>L S=>F P=>L |
atp9 | 10 | 294176 294165 294156 294144 294135 294087 294045 294035 294003 293973 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CGA=>UGA UCA=>UUA UCU=>UUU CCA=>CUA UCG=>UUG UCA=>UUA UCG=>UUG CUC=>UUC UCA=>UUA UCA=>UUA | R=>TERM S=>L S=>F P=>L S=>L S=>L S=>L L=>F S=>L S=>L |
nad1 | 5 | 537243-537629 166320-166511 164805-164888 561136-561393 520333-520395 | CDS CDS CDS CDS CDS | + + + + - | mRNA mRNA mRNA mRNA mRNA | NA NA NA NA NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
nad4L | 1 | 249264-249566 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
rpl16 | 13 | 237756 237789 237820 237839 237925 238271 238265 238199 238185 238096 238028 237968 237966 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CUC=>CUU CUC=>CUU CAG=>UAG UCU=>UUU CGC=>UGC UCG=>UUG CCA=>CUA CCA=>CUA UCC=>UCU CUC=>UUC ACA=>AUA ACC=>AUC GGC=>GGU | L=>L L=>L Q=>TERM S=>F R=>C S=>L P=>L P=>L S=>S L=>F T=>I T=>I G=>G |
rps19 | 4 | 234195 234217 234242 234300 | CDS CDS CDS CDS | + + + + | mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U | UCG=>UUG UCC=>UCU CCU=>UCU UCU=>UUU | S=>L S=>S P=>S S=>F |
( NA = Data Not Available )