atp9 - Plant Editosome Database - CNCB-NGDC

Summary

Gene: atp9
Function: ATP synthase
Species: 36
Editing Factors:18 (bCCP1, DYW2, DYW2A, DYW2B, EMP21, GRP23, Lon1, MEF37, MORF1, NUWA, ORRM2, ORRM4, OTP90, PAP2, PCW1, PGN, PPR_98, RIP1b)
Editing Types:
C-to-U (322)
U-to-C (9)
Editing Sites: 367 (C-to-U: 322   NA: 36   U-to-C: 9)
External Link: NCBI Gene
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid
Arabidopsis thalianaMitochondrion4
C-to-U: 4
278947
278977
279061
279118
CDS
CDS
CDS
CDS
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
UCA=>UUA
CCA=>CUA
S=>L
S=>L
S=>L
P=>L
Asclepias syriacaMitochondrion2
NA: 2
411406-411630
47130-47354
CDS
CDS
-
+
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Atrichum angustatumMitochondrion1
C-to-U: 1
114518CDS+C-to-UCAA=>UAAQ=>TERM
Batis maritimaMitochondrion1
NA: 1
207359-207583CDS-NANA=>NANA=>TERM
Beta macrocarpaMitochondrion5
C-to-U: 5
320202
320232
320278
320394
320405
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
AUC=>AUU
UCA=>UUA
CGA=>UGA
S=>L
S=>L
I=>I
S=>L
R=>TERM
Beta vulgaris subsp. maritimaMitochondrion5
C-to-U: 5
320239
320269
320315
320431
320442
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
AUC=>AUU
UCA=>UUA
CGA=>UGA
S=>L
S=>L
I=>I
S=>L
R=>TERM
Beta vulgaris subsp. vulgarisMitochondrion5
C-to-U: 5
72369
72380
72496
72542
72572
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGA=>UGA
UCA=>UUA
AUC=>AUU
UCA=>UUA
UCA=>UUA
R=>TERM
S=>L
I=>I
S=>L
S=>L
Brassica napusMitochondrion4
C-to-U: 4
112454
112484
112568
112625
CDS
CDS
CDS
CDS
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
UCA=>UUA
CCA=>CUA
S=>L
S=>L
S=>L
P=>L
Carica papayaMitochondrion1
NA: 1
440836-441060CDS-NANA=>NANA=>NA
Citrullus lanatusMitochondrion7
C-to-U: 7
242719
242749
242795
242833
242890
242911
242922
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
AUC=>AUY
UCA=>UUA
CCA=>CUA
UCA=>UUA
CGA=>UGA
S=>L
S=>L
I=>I
S=>L
P=>L
S=>L
R=>TERM
Cucumis sativusMitochondrion1
NA: 1
1310084-1310308CDS+NANA=>NANA=>NA
Cucurbita pepoMitochondrion6
C-to-U: 6
394399
394410
394431
394488
394572
394602
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGA=>UGA
UCA=>UUA
CCA=>CUA
UCA=>UUA
UCA=>UUA
UCA=>UUA
R=>TERM
S=>L
P=>L
S=>L
S=>L
S=>L
Cycas taitungensisMitochondrion1
C-to-U: 1
307144CDS-C-to-UCGA=>UGAR=>TERM
Ginkgo bilobaMitochondrion1
NA: 1
26537-26761CDS-NANA=>NANA=>NA
Hibiscus cannabinusMitochondrion2
C-to-U: 2
200418-200681
4544-4807
CDS
CDS
+
-
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>TERM
NA=>TERM
Ipomoea nilMitochondrion1
C-to-U: 1
256730-256987CDS-C-to-UCGA=>UGAR=>TERM
Lagerstroemia indicaMitochondrion1
NA: 1
116408-116632CDS+NANA=>NANA=>NA
Liriodendron tulipiferaMitochondrion1
NA: 1
136650-136874CDS+NANA=>NANA=>NA
Lotus japonicusMitochondrion1
C-to-U: 1
229056CDS-C-to-UUCA=>UUAS=>L
Millettia pinnataMitochondrion2
C-to-U: 2
248225
248255
CDS
CDS
-
-
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
S=>L
S=>L
Nelumbo nuciferaMitochondrion17
C-to-U: 17
275129-275353
275131
275139
275142
275149
275151
275163
275172
275220
275258
275262
275264
275271
275272
275273
275304
275334
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
CGA=>UGA
UCC=>UUC
UCA=>UUA
CUG=>UUG
UCU=>UUU
CCA=>CUA
UCG=>UUG
UCA=>UUA
AUC=>AUU
UCG=>UUG
UCC=>UCU
CCU=>CUU
CCU=>UCU
GUC=>GUU
UCA=>UUA
UCA=>UUA
NA=>TERM
R=>TERM
S=>F
S=>L
L=>L
S=>F
P=>L
S=>L
S=>L
I=>I
S=>L
S=>S
P=>L
P=>S
V=>V
S=>L
S=>L
Nothoceros aenigmaticusMitochondrion3
NA: 2
U-to-C: 1
35712-35841
35807
38773-38867
CDS
NA
CDS
-
+
-
NA
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Ophioglossum californicumMitochondrion21
C-to-U: 20
U-to-C: 1
62449
62454
62460
62463
62478
62539
62541
62550
62559
62592
62610
62634
62640
62643
62661
62664
62670
62681
62749
62919
62958
5'UTR
5'UTR
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
3'UTR
3'UTR
3'UTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
ACG=>AUG
CCA=>CUA
CCG=>CUG
GUC=>GUU
UCU=>UUU
UCG=>UUG
UUU=>UCU
UCA=>UUA
CCA=>CUA
ACU=>AUU
UCG=>UUG
UCU=>UUU
UCU=>UUU
UCA=>UUA
CCA=>CUA
CGA=>UGA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
T=>M
P=>L
P=>L
V=>V
S=>F
S=>L
F=>S
S=>L
P=>L
T=>I
S=>L
S=>F
S=>F
S=>L
P=>L
R=>TERM
NA=>NA
NA=>NA
NA=>NA
Oryza sativa Indica GroupMitochondrion1
C-to-U: 1
264308CDS+C-to-UCGA=>UGAR=>TERM
Oryza sativa Japonica GroupMitochondrion8
C-to-U: 8
263160
263221
263222
263232
263331
263345
263352
263363
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
GUC=>GUU
CUC=>UUC
UCG=>UUG
CCA=>CUA
CUG=>UUG
UCA=>UUA
CGA=>UGA
S=>L
V=>V
L=>F
S=>L
P=>L
L=>L
S=>L
R=>TERM
Phaeoceros laevisMitochondrion3
NA: 2
U-to-C: 1
72307-72436
72402
75367-75461
CDS
NA
CDS
-
+
-
NA
U-to-C
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Phlegmariurus squarrosusMitochondrion1
C-to-U: 1
29217CDS+C-to-UCAA=>UAAQ=>TERM
Phoenix dactyliferaMitochondrion10
C-to-U: 10
293973
294003
294035
294045
294087
294135
294144
294156
294165
294176
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
CUC=>UUC
UCG=>UUG
UCA=>UUA
UCG=>UUG
CCA=>CUA
UCU=>UUU
UCA=>UUA
CGA=>UGA
S=>L
S=>L
L=>F
S=>L
S=>L
S=>L
P=>L
S=>F
S=>L
R=>TERM
Pleurozia purpureaMitochondrion3
C-to-U: 1
NA: 2
151273-151410
151275
154342-154428
CDS
NA
CDS
-
+
-
NA
C-to-U
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Psilotum nudumMitochondrion14
C-to-U: 14
148104
148109
148169
148172
148181
148189
148223
148241
148271
148280
148295
148299
148305
148312
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
GCC=>GCU
UCA=>UUA
GCA=>GUA
UCU=>UUU
UCG=>UUG
CCC=>UCC
UCA=>UUA
UCA=>UUA
UCG=>UUG
UCA=>UUA
UCA=>UUA
AUC=>AUU
UUC=>UUU
CGA=>UGA
A=>A
S=>L
A=>V
S=>F
S=>L
P=>S
S=>L
S=>L
S=>L
S=>L
S=>L
I=>I
F=>F
R=>TERM
Ptychomnion cygnisetumMitochondrion1
C-to-U: 1
103971CDS+C-to-UCAA=>UAAQ=>TERM
Rhazya strictaMitochondrion10
C-to-U: 10
140278
140286
140289
140296
140310
140319
140409
140419
140420
140481
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGA=>UGA
UCC=>UUC
UCA=>UUA
CUG=>UUG
CCA=>CUA
UCG=>UUG
UCG=>UUG
CUU=>UUU
GUC=>GUU
UCA=>UUA
R=>TERM
S=>F
S=>L
L=>L
P=>L
S=>L
S=>L
L=>F
V=>V
S=>L
Zea mays subsp. maysMitochondrion7
C-to-U: 7
299251
299272
299281
299329
299371
299381
299443
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
UCG=>UUG
UCA=>UUA
UCG=>UUG
CUC=>UUC
UCA=>UUA
S=>L
P=>L
S=>L
S=>L
S=>L
L=>F
S=>L
Ziziphus jujubaMitochondrion1
NA: 1
129578-129802CDS-NANA=>NANA=>NA
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Sep 2026 (version 2.0)