- Scientific Name
- human gut metagenome
- Common Names
- human gut microbiota
- Bioproject
- PRJCA001337
- Biosample
- SAMC064995
- Accession No.
- GWHAAPL00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College
- Contact
- Hao Li(lihao@bjmu.edu.cn)
- Sequence author(s)
- Hao Li
- Released Date
- 2020-04-24
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo v2.04
- Sequencing & coverage
- Illumina HiSeq X Ten 60.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Hao Li, et al. Alterations of gut microbiota contribute to the progression of unruptured intracranial aneurysms. Nature Communications. 2020, 11(1): 3218.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAAPL00000000 | - | N3 | Draft genome in scaffold level | 2020-04-24 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 80,051,080 |
| GC content | 44.22% |
| Scaffold sequence No. | 46,557 |
| Maximum scaffold sequence length (bp) | 171,476 |
| Minimum scaffold sequence length (bp) | 500 |
| Average scaffold sequence length (bp) | 1,719 |
| Scaffold N50 (bp) | 2,823 |
| Scaffold N90 (bp) | 649 |