Genome Warehouse

Scientific Name: Citrus x changshan-huyou
Common Names: huyou;
Bioproject: PRJCA022025
Biosample: SAMC3265758
Accession No.: GWHEQVQ00000000
GWH reannotation accession: -
GSA raw reads: CRR994629
GVM variations of the species: -
Submitter Organization: colleage of agricultural and biotechnology, Zhejiang University
Contact: Changjiu Miao, 1539637481@qq.com
Sequence author(s): Changjiu Miao, Wenbo Chen, Yijing Wu, Lixia Wang, Siqing Zhao, Changjie Xu, Kunsong Chen, Donald Grierson
Released Date: 2024-04-19
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: hifiasm v0.19.6
Sequencing & coverage: Illumina HiSeq 2000 65.0
PacBio 76.0
Download: DNA GFF RNA CDS Protein
Reannotation Download: -
Publication(s): -

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHEQVQ00000000	-	Haplotype-resolved genome assembly of Huyou(Citrus changshanensis K. S. Chen et C. X. Fu)	Draft genome in chromosome level	2024-04-19	DNA GFF RNA CDS Protein
GWHEQVQ00000000.1	-	Haplotype-resolved genome assembly of Huyou(Citrus changshanensis K. S. Chen et C. X. Fu)	Draft genome in chromosome level	2024-05-16	DNA GFF RNA CDS Protein

Genome size (bp)	339,912,995
GC content	36.66%
Chromosomes sequence No.	9
Genome sequence No.	30
Maximum genome sequence length (bp)	49,486,279
Minimum genome sequence length (bp)	64,508
Average genome sequence length (bp)	11,330,433
Genome sequence N50 (bp)	32,272,659
Genome sequence N90 (bp)	4,367,322

Annotation of Whole Genome Assembly

Annotation Details